ggKbase home page

scn_reactorb_scaffold_163604_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(4124..5629)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDC7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 487.0
  • Bit_score: 565
  • Evalue 3.80e-158
ABC transporter related protein {ECO:0000313|EMBL:EGD47565.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 487.0
  • Bit_score: 565
  • Evalue 5.30e-158
ATPase components of various ABC-type transport systems, contain duplicated ATPase similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 487.0
  • Bit_score: 530
  • Evalue 2.90e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1506
ATGATTAATTTAAACAATATTTCTTTTAAATATGAAAGCGGAACACAAAGCGCAGGATTACAGGATGTCAATCTTCATATAAAAAAGGGAGAGGTAGTTTTATTATGTGGAGAATCCGGATGTGGCAAGACCACTCTTACCAGACTTATCAATGGACTAGTTCCACACTATTTTGGAGGTAAATTATCGGGAGAAGTATTAATCGGAGATAGAAACATTTCAGAAATGCCTTTATACGAGATATCAAAATATGTTGGCAGTGTTTTTCAAAACCCTCGTTCACAGTTTTTCTGTGTGGATACTGACTCAGAGCTTGCCTTTGGATGCGAAAATCAGGGGATGCCTATTGACGAAATTTTAGATAGAATTGAACTGACAGTTTCACATCTGGGTATAGAAAATTTAATGAAAAGAAGCATATTTAAGCTGTCTGGGGGAGAAAAACAAAAAATTGCTTGCGGCTGTGTACATACTGCATCTCCGGATATTATTGTACTTGATGAGCCATCTTCAAACCTTGATATACATTCAACAAAGAACTTGGCTGATATAATAGCACATTGGAAAAGTGAAGGCAAGACGATTGTAATTGCTGAGCATAGGCTATATTATCTTAAGGATATTGCAGATAGAATGATTTTTATGCGAGACGGTAAAATCGAAAAAGAATATAGCATGAGAGAAGCTGAAAATCTTTCATTTAGCGATATGGTTGATATGGGACTTAGAGCTTTAACCCTTGACGGAGTGGCATTGTTGAATAAGTCTTCGAATAAAATAGAGGAGAAAATTGAACTATTTGATTTTTGCTATAAATATAAAAGAGGGCTTTGTGTGTTGAATATTGACTCCTTGACTATTCCAAAAGGACAAATTATAGCGGTAATTGGAAGAAACGGTGCAGGAAAATCAACATTTGCACGCTGTATTTGTGGACTAAATAAGGAATTTAGCGGAAGAATGTTGATTGATAATAAAATCTATGATAAAAAACAATGCTTGAAAAATGCTTATATGGTGATGCAGGATGTAAATCATCAGCTTTTTACAGAAAGTGTGCTTGATGAAGTGCTTCTAAGCATTGAAGAAGAAAATATTGAAAAGGCAGAGGAAATTCTTGAGAGCTTAAATTTGCTTGATATGAAGGAATTACATCCTATGTCGCTTTCGGGGGGACAAAAACAACGCGTTGCTATTGCAAGTGCTATTGCTTCAAGGCGTGAAATAATTGTGTTTGACGAACCAACTAGTGGACTTGACCTGCGCCATATGGAGCAGGTATCAGAAAGCATAAAGCAGCTTAAGAATATGGGAAGAACAATTATAATTATCTCACATGATTTGGAATTGATTATGAAAACCTGTGATTATGTACTTCATTTTGAGGATGGGGAAGTTAGGGATGCCTATAGCATGAACGGCGAAGGGGTTGAATTGCTGATGAAATTCTTTAATTTTAATACAAGTGCATTACAAGAGAGAAAGCAAATATATAAGGTTTGTTAA
PROTEIN sequence
Length: 502
MINLNNISFKYESGTQSAGLQDVNLHIKKGEVVLLCGESGCGKTTLTRLINGLVPHYFGGKLSGEVLIGDRNISEMPLYEISKYVGSVFQNPRSQFFCVDTDSELAFGCENQGMPIDEILDRIELTVSHLGIENLMKRSIFKLSGGEKQKIACGCVHTASPDIIVLDEPSSNLDIHSTKNLADIIAHWKSEGKTIVIAEHRLYYLKDIADRMIFMRDGKIEKEYSMREAENLSFSDMVDMGLRALTLDGVALLNKSSNKIEEKIELFDFCYKYKRGLCVLNIDSLTIPKGQIIAVIGRNGAGKSTFARCICGLNKEFSGRMLIDNKIYDKKQCLKNAYMVMQDVNHQLFTESVLDEVLLSIEEENIEKAEEILESLNLLDMKELHPMSLSGGQKQRVAIASAIASRREIIVFDEPTSGLDLRHMEQVSESIKQLKNMGRTIIIISHDLELIMKTCDYVLHFEDGEVRDAYSMNGEGVELLMKFFNFNTSALQERKQIYKVC*