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scn_reactorb_scaffold_163604_9

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(10688..11299)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUU8_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 201.0
  • Bit_score: 258
  • Evalue 4.00e-66
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 201.0
  • Bit_score: 258
  • Evalue 1.10e-66
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABR49966.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 201.0
  • Bit_score: 258
  • Evalue 5.60e-66

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Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
ATGACTAATTTGATGAATACTGAGGAAAAAATTCTTCATTTCGGCAAACAAGAATTTTTACAAAATGGATTCGAGAAAGCGTCTCTTAGAAACATTGCCGCCGCTGCAAATATGACAACAGGTGCTATATATACTTATTTTAAGAATAAGAATGAATTGTTTGAAGCAATTGTTGCTCCGGTTTGTATGAAGGTAGAAAAAATGCTTAGTGAGCTTAGTAGTTTATACTATAACGACGATGGTATTGTGCATGAAATTACAATACAAGGAACTATGTCTGATCTTCATAAGATTTATGGATTTATCTATGATAATTTTGATATTTTCAGACTATTAGTCGTTGGCTCTGAAGGCTCTTCAAAGGCTGACTTTGTTCATACTATTGTAGATAGTGAAGTAAAGCATACAATTGCCTATTTAGACAAAATCAAAAAGGATGAGGGTGTAAGTGTAAATATAAAAAGCACAGTTATCCATATGATATCAGAGGGCTATATAAATGCAATCTTTGAGCCTGTCCGTCACAATATGAGCTATGAGCAAGCTGTTGAAAACCTTGAATTATTATGTGTCTTTTATACTGGTGGCTGGAAGAGCCTTTTGATGAAATAA
PROTEIN sequence
Length: 204
MTNLMNTEEKILHFGKQEFLQNGFEKASLRNIAAAANMTTGAIYTYFKNKNELFEAIVAPVCMKVEKMLSELSSLYYNDDGIVHEITIQGTMSDLHKIYGFIYDNFDIFRLLVVGSEGSSKADFVHTIVDSEVKHTIAYLDKIKKDEGVSVNIKSTVIHMISEGYINAIFEPVRHNMSYEQAVENLELLCVFYTGGWKSLLMK*