ggKbase home page

scn_reactorb_scaffold_161278_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1569..2267)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDJ5_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 231.0
  • Bit_score: 356
  • Evalue 1.60e-95
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 232.0
  • Bit_score: 365
  • Evalue 2.90e-98
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 231.0
  • Bit_score: 356
  • Evalue 4.60e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 699
ATGCCAAGAAGAGGAAAAAAATATCAAGACAGTATTAAAAGTTTTGACAAACAAAAATTACATGATCTAGGTGAAGCTGTAGAGGTAGTATTGAGTACAGCAAAAGCTAATTTTGATGAAACTGTTGAGCTTCATGTAAAATTAGGAGTAGATCCAAGACACGCAGACCAACAAGTAAGAGGAGCTGTAGTTCTCCCTCATGGAACTGGTAAAACAGTACGTGTTTTAGTATTTGCAAAAGGAGATAAAGCAAAAGAAGCTTTGGATGCAGGTGCAGAATACGTTGGTGAAAATGAATTAGCAGATAAAATTCAAAGAGAAAACTGGTTTGATTTCGACGTAGTTATAGCAACTCCGGATATGATGGGTGTTGTAGGAAAGCTTGGTAGAGTATTAGGACCTAAGGGAATAATGCCAAACCCTAAATCAGGAACTGTAACATTTGATTTAGCAAAAGCTATCGAAGAAATTAAAGCTGGTAAGGTTGAGTACAGACTTGACAAGACTGCTATTATTCACGTTCCAGTGGGTAAAAAATCTTTCGGTACAGAAAAGTTAGTTGACAATATATCAGCTATAACAGATGCAATAGTTAAAGCAAAGCCAGCATCAGCAAAAGGTAATTATCTAAAGAGCGTTACTTTGACAAGCACTATGGGACCTGGAGTTAAATTAAACACATCTAAGTTGATGAATTAA
PROTEIN sequence
Length: 233
MPRRGKKYQDSIKSFDKQKLHDLGEAVEVVLSTAKANFDETVELHVKLGVDPRHADQQVRGAVVLPHGTGKTVRVLVFAKGDKAKEALDAGAEYVGENELADKIQRENWFDFDVVIATPDMMGVVGKLGRVLGPKGIMPNPKSGTVTFDLAKAIEEIKAGKVEYRLDKTAIIHVPVGKKSFGTEKLVDNISAITDAIVKAKPASAKGNYLKSVTLTSTMGPGVKLNTSKLMN*