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scn_reactorb_scaffold_167331_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3..830

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN03_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 277.0
  • Bit_score: 197
  • Evalue 1.10e-47
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDC50303.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 277.0
  • Bit_score: 197
  • Evalue 1.60e-47
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 266.0
  • Bit_score: 178
  • Evalue 1.60e-42

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Taxonomy

Clostridium sp. CAG:58 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 828
ACTATATCATTAGAAATGGGAGAAATTGACGCTTTTATTAACGTTTCACCTTCAGACATTGCAACAATTGAAGGTAATTCAAGCTTAAAGGTTGATCAGGTTTCATCATATATATTCAGATTTTTAGGTATAAATTGTGATAAAGAACCTTTTAACAATGTAAAGGTAAGACAGGCAATTGCATATGCATTAGATAAAGAGGGCATCATAATAGGTGCAGAAGATGGTATAGGACAAGTAGCAGAAAGCCATATACCTCAAAACGTAGTAGGATATAATGCTTCATTTAAGGGAAATGAAAAAAATATCGAAAAGGCAAAGCAGCTTTTAGCGGAAGCAGGATATCCAAATGGTTTTAGCAGTGAATTACTTGCTACAGAAAACAGAAACACTCACGCACAAATAATTCAAGCTAATCTAAGAGAAATAGGTATCACTGTAGACATCAAGCTGTATGAATCAGGAACTTTCTATGAGCTTTTAGAAAATGGCGAATTTGAATTACAAATTTTAGGATGGTCATATATTTGTCCTGATCCGGATGTTGCAATATACGATTTATATAAAAGCGGTGGATTTATGGCAGGTAACTATGGAAGATACAACAGTCCTAAAATGGACCAGTTGCTGGACAATGGAAGAAAGTCTGTAAATGCTGATGAAAAACAAAAAATATATGAAGAAATAGAAGAATTGGCTAAGGAAGATGCTTTCAATATACCTCTATACTGGACAATGTCTAATATAGCATATAATAAAGGGCTAAATGGAGTAGAAGCTTCACCAAAATTATCATATTTTGTTTATAATTTTAGCTGGTCTAAATAG
PROTEIN sequence
Length: 276
TISLEMGEIDAFINVSPSDIATIEGNSSLKVDQVSSYIFRFLGINCDKEPFNNVKVRQAIAYALDKEGIIIGAEDGIGQVAESHIPQNVVGYNASFKGNEKNIEKAKQLLAEAGYPNGFSSELLATENRNTHAQIIQANLREIGITVDIKLYESGTFYELLENGEFELQILGWSYICPDPDVAIYDLYKSGGFMAGNYGRYNSPKMDQLLDNGRKSVNADEKQKIYEEIEELAKEDAFNIPLYWTMSNIAYNKGLNGVEASPKLSYFVYNFSWSK*