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scn_reactorb_scaffold_165987_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2860..4776)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded-DNA-specific exonuclease RecJ n=7 Tax=Clostridium thermocellum RepID=A3DF49_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 565.0
  • Bit_score: 444
  • Evalue 1.20e-121
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 565.0
  • Bit_score: 444
  • Evalue 3.50e-122
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ABN52578.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 565.0
  • Bit_score: 444
  • Evalue 1.70e-121

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1917
ATGAAAAAAGTCAAGCTGAAAGTCAATGATTTTAGTGAAGAAAAGGTTAAGTTTATCAGCAGCACATTTAATATAACTGAAATATCTGCTAAAATATTGCTAAACAGAGGCTTGGATACAGTAGATGACATTAATATTTTTTTAGATCCTGAATTAAAATATTTAGAAAATACTGACAATTTTAAAGATATAAACAAGGCGTGCAAAAGAATTCTAGAGGCTTTGGAAAATAAAGAAAAAATATTGATTTATGGTGACTATGATGTTGACGGCGCAACATCTATTAGTCAATTCATTTTATTTTTAAAAAGAATTAATGCAAATGTTGATTATTATGTTCCTGAGAGGGAAAATGAAGGATATGGAATAAGTGAAGAGTTTTTAAATAGTATTGTTAAAAGAGATATTGATTTATTAATAACTGTTGACTGTGGTATATCAGAGGTTGAGGCTATTGACAGGGTTAATGAATCAGGTATTGATACTATATTGATAGATCATCATCAATGTGGCGAGGTTATTCCTCGAGCATATGCTGTTATAAATCCTAAGCAAAAAGATTGTCCGTCAAAAAATAAAAATCTTTGCGCCTCAGGTCTTTGTTATAAGTTTTTGCTTCATTTGAACAGATATCTGAAAATTGAAGGTATTGAAGATATTTTGCTTGAGCTTGCCTGCCTTGGCACGATAGCAGATATAGTTGATTTAATAGATGATAATAGAATTATTACATTTAATGGTCTTAAAAATATTAATAATTCCAAGCTTATAGGTCTTAAAAAACTTATTGAAAAGGCTGGCATTTCTGATAAGGCAATTGAAGCCTTTCATATAGGATACATTCTGGCTCCAAGAATCAATGCAGCTGGAAGAATGGACAGTGCAAGAAAGGCTGTAGAGCTCTTGCTTGCTGATAATGAAAAAGATGCAGAACGCTTAGCTGATGAGCTGGAAGGATTTAATACATTAAGAAAGCAAACTGAACAAGAGATATTTAATGAAGCTATTGAAAAGATTGAAAGGGATTTTTTGTATAAAAAAAATCTTATAGTTGTTAGTGGTGATGATTGGCATGAGGGAGTTTTGGGTATTGTATCATCAAGGATAACTGAAAAGTATGATAAGCCTTCAGTAGTAATTTCAATTGACGGTGATATGGCAAAGGCTTCTGCACGAAGTCTTGAATACCTGAATATGTTTGAAGCTTTAAACTCCGTTAGTCATATATTGATAAAATATGGGGGACATAAGCTGGCAGCAGGCTTCACTTTGAAAAAGGCTTATATCAATGAATTAAGCATTGAGCTTAATAAATTTGCTGATAAGATTTTAGATAAGAAGGAAATTGAAAAAATTGTTGAGGTTGATTCTTATATAAGGATTAAGGATATAAACGAAAACTTATATAATGAGATCTGCAGATTCGAGCCGTTTGGTCATGGGAATCCGAAGCCTAGCTTTGCAGTTGTAGATTTTAATATCCTTGATTTAAAAAGAGTTGGAAAGGATAAAAAGCATATTAGCTTTTTATTAAAGGATAATGAAAATTCAATAAAGGTGATTGGCTTTGATAAAATTAGACTTTTGGAAAAATTGCTTTTAAATCCTGAAGCTCTGGTTGTAAATATTTCTGAAAATGAATTTAGAGGTAATGTTGATTTACAGCTTATTTTACAGAATGTTGAACATTATGCTTTTTCAAAGCATGATATTGATGCAAATAAATCTAAGATAATTTATTCGGTAATAAATAAAAGCAAATCAAAAATTATCAAGACGGATATTTTTGAATTTGCAGAAACTATAAGCAGAATTTATAATATTGATATCACGGCAGTTGATATAGTCCGTATTTTAAATAGTGAAAATAAACTGGACTATATAATGAAAAATGATATACTTTATATAAAAAAATAA
PROTEIN sequence
Length: 639
MKKVKLKVNDFSEEKVKFISSTFNITEISAKILLNRGLDTVDDINIFLDPELKYLENTDNFKDINKACKRILEALENKEKILIYGDYDVDGATSISQFILFLKRINANVDYYVPERENEGYGISEEFLNSIVKRDIDLLITVDCGISEVEAIDRVNESGIDTILIDHHQCGEVIPRAYAVINPKQKDCPSKNKNLCASGLCYKFLLHLNRYLKIEGIEDILLELACLGTIADIVDLIDDNRIITFNGLKNINNSKLIGLKKLIEKAGISDKAIEAFHIGYILAPRINAAGRMDSARKAVELLLADNEKDAERLADELEGFNTLRKQTEQEIFNEAIEKIERDFLYKKNLIVVSGDDWHEGVLGIVSSRITEKYDKPSVVISIDGDMAKASARSLEYLNMFEALNSVSHILIKYGGHKLAAGFTLKKAYINELSIELNKFADKILDKKEIEKIVEVDSYIRIKDINENLYNEICRFEPFGHGNPKPSFAVVDFNILDLKRVGKDKKHISFLLKDNENSIKVIGFDKIRLLEKLLLNPEALVVNISENEFRGNVDLQLILQNVEHYAFSKHDIDANKSKIIYSVINKSKSKIIKTDIFEFAETISRIYNIDITAVDIVRILNSENKLDYIMKNDILYIKK*