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scn_reactorb_scaffold_166682_8

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(7872..8771)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 299.0
  • Bit_score: 370
  • Evalue 1.50e-99
RNA pseudouridine synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481BB8 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 300.0
  • Bit_score: 372
  • Evalue 3.70e-100
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 299.0
  • Bit_score: 370
  • Evalue 3.00e-100

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Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
ATGGAAGAAATTAAATTGATTTCTGAAGAAAATGGTACAAGAATTGATACTTATATCTCTTCAAGGCTTGAAACTTTGTCGAGAAGTGCTGTTCAGAAGTTAATAGAAGACGGAAACGTTAATGTAAATAATAAAATAGTAAACAAAAATTATAAATTAAAATTAGATGATGAGATAGTTTTATTGATGCCTGAGCCGCAAGTCTTAGATGTGATAGCAGAGGATATAGCTCTTGATGTAGTGTATGAGGATGAGGATGTTGCCGTTATAAATAAGGCACAAGGCATGGTAGTCCACCCAGCAGCAGGTCATTACACTGGAACACTTGTAAATGCACTTATGAGCAAGCTGGACGATTTATCATCAATAAATGGAGTTTTAAGACCTGGAATTGTTCATAGATTAGATAAAAATACTTCAGGTCTTTTAATTATCGCTAAAAACGATCATGCTCATAATTTTTTATCAGAGTGCTTAAAAGAACATTCGATAAACAGAATATATTATGCCTTGGTAGAGGGTGTAGTAAAAAATGATAAGGATGTAATTAATGCACCATTAGGCAGAAGTGAAAAGGACAGAAAAAAAAGATGTGTAACAACTAGAAACAGCAAGGAAGCCATAACTAATTATGAGGTTGTGAAAAGATATAAGGCATATACCTTAGTAAAGCTCAAACTGGAAACAGGCAGAACGCATCAGATTCGTGTTCACATGAAATATATAGGTCATCCTGTTGTTGGAGATGAGGTTTATGGCAGGGAGGATAAAAAGTTTGGATTAAAAGGACAGCTTTTACACTCCAAGTCAATTGGCTTTGTGCATCCAACGAGCAAGAAATACATGGAGTTTGATTCTGAGCTTCCAAAATATTTTGCTGATGTTTTAGAGAAGATATAG
PROTEIN sequence
Length: 300
MEEIKLISEENGTRIDTYISSRLETLSRSAVQKLIEDGNVNVNNKIVNKNYKLKLDDEIVLLMPEPQVLDVIAEDIALDVVYEDEDVAVINKAQGMVVHPAAGHYTGTLVNALMSKLDDLSSINGVLRPGIVHRLDKNTSGLLIIAKNDHAHNFLSECLKEHSINRIYYALVEGVVKNDKDVINAPLGRSEKDRKKRCVTTRNSKEAITNYEVVKRYKAYTLVKLKLETGRTHQIRVHMKYIGHPVVGDEVYGREDKKFGLKGQLLHSKSIGFVHPTSKKYMEFDSELPKYFADVLEKI*