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scn_reactorb_scaffold_171966_7

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 5735..5959

Top 3 Functional Annotations

Value Algorithm Source
2-hydroxyglutaryl-CoA dehydratase, D-component n=3 Tax=Clostridiales RepID=B0P122_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 69.0
  • Bit_score: 92
  • Evalue 1.80e-16
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01394.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 60.0
  • Bit_score: 93
  • Evalue 1.20e-16
yjiM; putative 2-hydroxyglutaryl-CoA dehydratase (hgdB-like) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 60.0
  • Bit_score: 86
  • Evalue 2.20e-15

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Taxonomy

Lachnospiraceae bacterium TWA4 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 225
ATGAGGGAGAAAAATTATCTTATTAATCGTATGGAGGTTAGAATGGAAGTAAGAAAAGAGCTGCCAGCAGTGTTTGAAGAATTTGCTGAGGCGAGAAGAAACGCTTTTTTATCCGTTAAGGAAATTAAGGAAAAAGGAACACCTGTTGTAGGGGTTTTTTGTACATTTATGCCGGAAGAAATTCCAATGGCTATAGGCGCTGTGCCTATTAGTCTATGTTCATTT
PROTEIN sequence
Length: 75
MREKNYLINRMEVRMEVRKELPAVFEEFAEARRNAFLSVKEIKEKGTPVVGVFCTFMPEEIPMAIGAVPISLCSF