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2019_SCN_bioreactor_t3_planktonic_scaffold_132218_16

Organism: 2019_SCN_bioreactor_t3_planktonic_Azospirillum_lipoferum_68_106

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(20355..20810)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator for superoxide response (MerR family) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHL6_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 151.0
  • Bit_score: 289
  • Evalue 1.60e-75
MerR family transcriptional regulator {ECO:0000313|EMBL:KJR62632.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 151.0
  • Bit_score: 295
  • Evalue 2.40e-77
soxR; transcriptional activator for superoxide response (MerR family) similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 151.0
  • Bit_score: 289
  • Evalue 4.50e-76

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCTGTCACCTGAGGACTACGACAAGGACCTGACGGTGGGGGAGGTGGCGCGCCGGTCCGGCGTGGCGGTCTCGACCATCCACTTCTACGAGGCGCAGGGACTGATCCGCAGCTGGCGCAATCCTGGCAACCAGCGCCGCTTCTCCCGCGACGTGCTGCGGCGGGTGGCGGTCATCAAGGTGGCGCAGCGGCTCGGCATCTCGCTCGCCTCCATCGCCGACGCGCTGAACGCCCTGCCGCAGGACCGCTCCCCCACCACCGCCGACTGGCGCCGCATGTCGGAGCGCTGGCGGGCGGAGCTGGACGACCGCATCGCCAAGCTGACCAAGCTGCGCGACAATCTGGACGGCTGCATCGGCTGCGGCTGCCTGTCGATCCGCGACTGCCCCCTGCGCAACCCGTGGGACGAGCTTGGCGACGCCGGCGCCGGCCCGCGGCTGCTCGACCCCGCCTGA
PROTEIN sequence
Length: 152
MLSPEDYDKDLTVGEVARRSGVAVSTIHFYEAQGLIRSWRNPGNQRRFSRDVLRRVAVIKVAQRLGISLASIADALNALPQDRSPTTADWRRMSERWRAELDDRIAKLTKLRDNLDGCIGCGCLSIRDCPLRNPWDELGDAGAGPRLLDPA*