ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_132218_19

Organism: 2019_SCN_bioreactor_t3_planktonic_Azospirillum_lipoferum_68_106

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 23394..24242

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B2H8_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 282.0
  • Bit_score: 407
  • Evalue 5.70e-111
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 282.0
  • Bit_score: 407
  • Evalue 1.60e-111
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS54798.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 282.0
  • Bit_score: 407
  • Evalue 8.00e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGAGTGGAGCGACCTTCGGATTTTCCTGGCGATCGCCCGCGAGGGCACGCTCGGTGCGGCGGCACGGCGGGTCGGACAGACCCAGCCGACCATGGGGCGTCGTCTGCGCGCGCTGGAAGACGCGGTGGGGCACACGCTGTTCCAGCGGACCGCCGACGGCTTCGTGCTGACCGACGAAGGGGCGGCTGTGTTGCGCCACGCTGAGCGCATGGAAGAGGAAAGCCTTGCGCTGGAACGCGAACTGGCCGGCCAAGGCGGACGGCTGGAGGGCAGCCTGCGGCTGTCATCCTCCGACTGGTTCGGCCTGCATATGCTGACGCCGGTCATTCACGAGTTCACCCAGCGCCATCCCGGTGTGGTGGTGGAGCTGTTGACCGAGTCACGGTTGCTGAGCCTGTCCAGGCGCGAGGCCGACCTCGTGTTCCGCATCCGTCCGTTCGACGAGCCGGAAGTGGTGCAGCGCAAGCTGACCCGGATCGATTACGCCCTTTACGGGATCGTCGGCAGCCCGCCGCCGGAGGTCGGGGACGGCACGGGCTGCGCGCTGGTCACGATGGACGTCGCCTTTGGCGGCATGCCGGATGTCACATGGTTGCGGCGGATGCTGCCCAACGCCCGCGTCGCGTTTCGCAGCAACAACCGTGACGTCCAGGCCGCCATGGCGGCCTTCGGCGTCGGATTGGCGGTTCTGCCGCGCCCGATCGGCGATGCCTTGGACAGGTTGCAGGTCATCGACCTTGGCGAACCGCCGCCCGGACGCGATGTCTGGGTTGGCTATCACCAGGATCTCCGCCGGCTGGCACGCCTGCGCGCCCTGCTGGATCTGATGATCGACCGCTTTTCGTGA
PROTEIN sequence
Length: 283
MEWSDLRIFLAIAREGTLGAAARRVGQTQPTMGRRLRALEDAVGHTLFQRTADGFVLTDEGAAVLRHAERMEEESLALERELAGQGGRLEGSLRLSSSDWFGLHMLTPVIHEFTQRHPGVVVELLTESRLLSLSRREADLVFRIRPFDEPEVVQRKLTRIDYALYGIVGSPPPEVGDGTGCALVTMDVAFGGMPDVTWLRRMLPNARVAFRSNNRDVQAAMAAFGVGLAVLPRPIGDALDRLQVIDLGEPPPGRDVWVGYHQDLRRLARLRALLDLMIDRFS*