ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_96830

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_31
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14183..15172
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1411646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS10.;"
DNA-directed RNA polymerase subunit alpha n=242 Tax=Bacteria RepID=RPOA_ENT38
DNA-directed RNA polymerase subunit alpha
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_32
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15213..15599
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=29 Tax=Enterobacteriaceae RepID=D2TN93_CITRI
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1354030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae P101.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_33
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15707..16075
DNA (369bp) protein (123aa)
Putative cytoplasmic protein n=1 Tax=Klebsiella oxytoca E718 RepID=I6X5R2_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EWF61686.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_34
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16078..16503
DNA (426bp) protein (142aa)
Zinc-responsive transcriptional regulator n=2 Tax=Klebsiella oxytoca RepID=G8WKR9_KLEOK
zntR; zinc-responsive transcriptional regulator
HTH-type transcriptional regulator zntR {ECO:0000313|EMBL:AFN34437.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_35
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16562..16822
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Klebsiella sp. OBRC7 RepID=J4WJK3_9ENTR
ribosome rescue factor A
Alternative ribosome-rescue factor {ECO:0000313|EMBL:EWF61684.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_36
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16776..17189)
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=8 Tax=Klebsiella RepID=G8WKR7_KLEOK
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Large-conductance mechanosensitive channel
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_37
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17330..18706)
DNA (1377bp) protein (459aa)
Potassium transporter peripheral membrane component n=2 Tax=Klebsiella oxytoca RepID=G8WKR6_KLEOK
trkA; potassium transporter peripheral membrane component
Trk system potassium uptake protein trkA {ECO:0000313|EMBL:EWF61682.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_38
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18728..20017)
DNA (1290bp) protein (430aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WKR5_KLEOK
16S rRNA methyltransferase B
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_39
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20069..21016)
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=Klebsiella RepID=H3LDW5_KLEOX
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_40
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21031..21540)
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
Peptide deformylase n=3 Tax=Klebsiella RepID=G8WK26_KLEOK
peptide deformylase
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_41
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21670..22794
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WK25_KLEOK
DNA processing protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:EWF61678.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_42
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22766..23239
DNA (474bp) protein (158aa)
Protein Smg n=4 Tax=Klebsiella RepID=H3LDW2_KLEOX
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_43
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23267..23809
DNA (543bp) protein (181aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WK23_KLEOK
DNA topoisomerase {ECO:0000313|EMBL:EWF61676.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
DNA topoisomerase type IA zn finger domain-containing protein
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_44
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23814..24386
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
Threonylcarbamoyl-AMP synthase n=3 Tax=Klebsiella oxytoca RepID=G8WK22_KLEOK
tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_45
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24390..25208
DNA (819bp) protein (273aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Shikimate dehydrogenase n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WK21_KLEOK
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_46
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25205..25462
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WK20_KLEOK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWF61673.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_96830_47
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25438..25992)
DNA (555bp) protein (185aa)
Carbonic anhydrase n=1 Tax=Klebsiella oxytoca E718 RepID=I6VZC2_KLEOX
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:AFN29900.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
Displaying items 31-47 of 47 in total

View Taxonomy