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2019_SCN_bioreactor_t3_planktonic_scaffold_19762_29

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: 36400..36612

Top 3 Functional Annotations

Value Algorithm Source
RNA chaperone/anti-terminator n=4 Tax=Klebsiella oxytoca RepID=G8W7W0_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 145
  • Evalue 1.30e-32
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 145
  • Evalue 3.70e-33
Cold shock protein CspA {ECO:0000313|EMBL:GAL50489.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 145
  • Evalue 1.80e-32

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Taxonomy

Citrobacter farmeri → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTTGGCTTCATCACTCCTGACGATGGTTCTAAAGACGTGTTCGTACACTTCTCTGCTATCCAGAACGAAGGCTACAAATCTCTGGACGAAGGTCAGAAAGTTTCCTTCACCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGCAATGTAACCAGCCTGTAA
PROTEIN sequence
Length: 71
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNEGYKSLDEGQKVSFTIESGAKGPAAGNVTSL*