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2019_SCN_bioreactor_t3_planktonic_scaffold_46127_9

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: 8416..12639

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1407.0
  • Bit_score: 2755
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1407.0
  • Bit_score: 2753
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Klebsiella RepID=H3LFY8_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1407.0
  • Bit_score: 2755
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4224
GTGAAAGACTTATTAAAGTTTCTGAAAGCGCAAACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCATCGCCAGACATGATCCGTTCATGGTCTTTTGGTGAAGTTAAAAAGCCGGAAACCATTAACTACCGTACGTTCAAACCTGAGCGTGACGGCCTTTTCTGTGCGCGTATTTTCGGGCCAGTAAAAGACTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGCGGTGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTGCGCCGTGAGCGTATGGGCCACATCGAGCTGGCGTCTCCGACCGCCCACATCTGGTTCCTGAAGTCTCTGCCGTCCCGTATCGGCCTGCTGCTCGATATGCCGCTGCGCGATATCGAACGCGTGCTGTACTTCGAATCCTATGTGGTTATCGAAGGCGGTATGACCAACCTGGAACGCCAGCAGATCCTGACTGAAGAACAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTTGACGCGAAGATGGGTGCGGAAGCTATCCAGGCCCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGTGAAACTCTGCGCGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAGAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTACAGTCTGGCAACAAGCCGGAGTGGATGATCCTGACCGTTCTGCCGGTTCTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGCGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGCAACGAAAAACGTATGCTGCAGGAAGCGGTCGACGCCCTGCTGGATAACGGTCGTCGCGGTCGTGCGATCACCGGTTCTAACAAACGTCCTCTGAAATCTTTGGCCGATATGATCAAAGGTAAGCAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGCGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCGCTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGCCTCGCCACCACCATCAAAGCCGCTAAGAAAATGGTTGAGCGTGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTGATCCGCGAACACCCGGTACTGCTGAACCGTGCACCAACCCTGCACCGTCTGGGTATCCAGGCATTTGAGCCGGTACTGATCGAAGGTAAAGCTATTCAGCTGCACCCGCTGGTTTGTGCGGCATACAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTATCTCCGGCGAACGGCGAACCAATCATCGTTCCGTCTCAGGACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCTGAGCGTATTTATCGCGCTGGCCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAATACGAAAAAGATGAAAACGGCGAGTTCGTTGCGAAAACCAGCCTGAAAGATACGACCGTTGGTCGCGCCATTCTGTGGATGATCGTACCGAAAGGTCTGCCTTTCTCCATCGTCAACCAGGCGCTGGGCAAGAAAGCCATCTCTAAGATGCTGAACACCTGCTACCGTATTCTGGGCCTGAAACCGACCGTTATTTTTGCGGACCAGACGATGTACACCGGCTTTGCTTATGCAGCGCGCTCAGGTGCATCCGTTGGTATCGATGACATGGTCATCCCGGAGAAAAAATACGAGATCATCAGCGAAGCGGAAGCGGAAGTTGCTGAGATTCAGGAGCAGTTCCAGTCGGGTCTGGTTACCGCTGGCGAACGCTACAACAAAGTTATCGATATCTGGGCCGCGGCGAACGATCGTGTATCCAAAGCGATGATGGACAACCTGCAAACTGAAACCGTTATTAACCGTAACGGCGAAGAAGAGCAGCAGGTCTCCTTCAACAGCATTTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCTGCACAGATTCGTCAGCTTGCCGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACGCACGGTGCGCGTAAAGGTCTGGCGGATACCGCACTGAAAACGGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTTGCGCAGGACCTGGTCGTGACTGAAGACGACTGTGGCACCCTGGAAGGCATCACCATGACCCCGGTTATCGAGGGTGGCGATGTTAAAGAGCCGCTGCGCGATCGCGTACTGGGTCGTGTGACCGCTGAAGACGTTCTGAAGCCGGGTACGGCGGACATTCTGGTTCCACGCAACACGCTGCTGCACGAGCACTGGTGCGATCTGCTGGAAGAGAACTCCGTTGACTCCGTCAAAGTGCGTTCCGTTGTATCCTGTGACACCGACTTTGGTGTATGTGCGCACTGCTACGGTCGTGACCTGGCGCGTGGCCACATCATCAACAAAGGTGAGGCTATCGGCGTTATCGCGGCACAGTCCATCGGTGAGCCGGGTACACAGCTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAGTCCAGCATCCAGGTGAAAAACAAAGGTAGCATCCGTCTGAGCAATGCGAAGTCGGTTGTGAACTCCAGCGGTAAGCTGGTTATTACTTCCCGTAATACCGAGCTGAAGCTGATCGACGAATTCGGTCGTACCAAAGAGAGCTATAAAGTGCCTTACGGCTCTGTTATGGCGAAAGGTGATGGCGAGCAGGTTGCCGGCGGTGAAACCGTAGCAAACTGGGATCCGCACACCATGCCGGTTATCACCGAAGTGAGTGGTTTTGTCCGCTTCACTGACATGATTGACGGCCAGACCATTACTCGTCAGACCGACGAGCTGACCGGTCTGTCTTCTCTGGTGGTTCTGGATTCTGCAGAGCGTACCACTGGCGGTAAAGATCTGCGTCCGGCGCTGAAAATCGTTGATGCTCAGGGCAATGACGTTCTGATCCCTGGCACCGATATGCCTGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTCCAGATCAGTTCTGGTGACACCCTGGCACGTGTACCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCCGACCTGTTCGAAGCGCGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGCATCATTTCCTTCGGTAAAGAAACCAAAGGGAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCTAAGTGGCGTCAGCTCAACGTGTTCGAAGGTGAACGCGTAGAACGTGGTGACGTGGTTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGCGTGCATGCTGTGACTCGTTACATCGTTAACGAAGTTCAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAGCACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCGACCATCGAAAGCGCCGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTTAAGATTGCTAACCGCGATCTGGAAGCGAACGGCAAAGTGGGTGCAACATTCTCCCGCGATCTGCTGGGTATCACCAAAGCGTCCCTGGCAACCGAATCGTTCATCTCTGCCGCATCGTTCCAGGAGACCACGCGTGTCCTGACCGAAGCAGCCGTTGCGGGTAAACGCGACGAACTGCGTGGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCCGGTACCGGTTATGCGTACCACCAGGATCGTATGCGCCGTCGCGCAGCGGGCGAACTGCCAGCAGCGCCGCAGGTCAGCGTGGAAGAGGCTTCTGCTAACCTGGCAGAACTGCTGAACGCGGGTCTGGGCGGTTCTGACAACGATTAA
PROTEIN sequence
Length: 1408
VKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRNGEEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRLSNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRDLEANGKVGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVSVEEASANLAELLNAGLGGSDND*