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2019_SCN_bioreactor_t3_planktonic_scaffold_40221_88

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(98460..99974)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator GabR of GABA utilization n=1 Tax=Klebsiella oxytoca E718 RepID=I6VP29_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 504.0
  • Bit_score: 1006
  • Evalue 8.50e-291
GntR family transcriptional regulator/MocR family aminotransferase {ECO:0000313|EMBL:EWF61811.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 504.0
  • Bit_score: 1009
  • Evalue 1.40e-291
decarboxylase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 504.0
  • Bit_score: 1006
  • Evalue 2.40e-291

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
TTGCGTTCGCTTATCGCAGACCTGGTGCTGGTCAGATTGCAGAAAGAAACCGATCCGCTCCTGCACAAGCGCCTTTACAAGGCGATTCGCCACGCCATTCTGGATGGTTCTCTCCCGCCCCATAGCCGCCTGCCCCCTTCACGGGATCTGGCGGGAGAGCTGAAAATGTCTCGCAACACAATTTTAACAGTTTACGAACAATTGCTGGCTGAGGGGTATGTCGTGTCCCGTCGCGGCAGCGGAACATTCGTCGCGAAAACGCTGCCCGATATGTTTCTTCCAACCAGCAGCGCCAGTGAAAGCAGCCCTGCGCCAGCAGCCAGCGCGCCCATCTCCCGACGCGGCCAGCATCTGCTGGGGCACATCAGCGCCAGCCCGCGTCAGTGGGGGGCATTTATCCCCGGCGTACCGGACGTCAATGCGTTTCCCCACCCGCTGTTCAGTAAAATCCAGGCGCGTATCAGCCGCCGTCCAAAACCCGAACAGCTCAGCTATAGCTGTAACGGCGGAACGGCCGAGCTGCAGCACGCGTTGGTGGACTATCTGAGAGTAGCGCGCGGCGTTCAGTGCCAGGCAGATCAAATTCTTATTACTGAAGGGATCCATCAGGCTATCGACCTGATCACCCGCATGCTGTGCGACCGCGGCGATCTCGCCTGGGTGGAGGAGCCGTCCTACTGGGGCATTCGCCATGTGCTGGCGATGAATGAAGTGCGGGCCGAGCCCGTGGTGGTTGATGCCAGCGGCCTGTGCCCGCCCGAAAGCATAGCCGAAGCCCCGCGGCTGATCTTCGTTACGCCATCCCATCAGTACCCCCTCGGCGCGGTAATGAGCCTTGAGCGCCGACAGCGCCTGCTCACCCTGGCCCATCAGCACGGCAGCTGGATTGTGGAAGATGATTACGACAGCGAGTTTCGCTTTTCCGGTCAGCCGATCCCGGCGCTACAGGGCTTAGTCCCCGAAGCGCCGGTGGTCTACGTCGGTACGTTCAGTAAAACGCTCTACCCGGGGCTGCGGCTGGGCTACGTCGTGCTGCCTCGACCATTGGCGGCTGAACTCAAAAACGCCCACGCCGAGCTCTACCGCGGCGGCCATTCGCTTATCCAGCTGGCGCTGGCGGAATTTATCAACGCCGGTCATTACTCGGCGCATATTCGCCGCATGCGCCTGCTCTACAGCCGCCGTCGCGTCTTTTTGACCGAGCTGATTCAGCGGCACTGCGGGCCGCACGCGCTGTCGGACTTCAGCGATAATGCCGGACTGCATTTGATCCTGAATTTGCCGGATGAGGCGGATGACGTGGCGATTGCCCGCGATGCCAACGCGCGCCATATTTTAGTGCGTCCGCTGTCGCGCTATTACCTGACGGCGCAGCGGAAGAAAGGGCTGTTGATGGGTTTTGCTTCGCAGCCGGAAACGCAGATGGAACCGGCGTTCAACGTCCTGCTTGAGTGTTTGAAAATGCACTGCCCGCAGGCGCTGGCGGAGGCAGAAAAACAAAACGCCCCATCGTAA
PROTEIN sequence
Length: 505
LRSLIADLVLVRLQKETDPLLHKRLYKAIRHAILDGSLPPHSRLPPSRDLAGELKMSRNTILTVYEQLLAEGYVVSRRGSGTFVAKTLPDMFLPTSSASESSPAPAASAPISRRGQHLLGHISASPRQWGAFIPGVPDVNAFPHPLFSKIQARISRRPKPEQLSYSCNGGTAELQHALVDYLRVARGVQCQADQILITEGIHQAIDLITRMLCDRGDLAWVEEPSYWGIRHVLAMNEVRAEPVVVDASGLCPPESIAEAPRLIFVTPSHQYPLGAVMSLERRQRLLTLAHQHGSWIVEDDYDSEFRFSGQPIPALQGLVPEAPVVYVGTFSKTLYPGLRLGYVVLPRPLAAELKNAHAELYRGGHSLIQLALAEFINAGHYSAHIRRMRLLYSRRRVFLTELIQRHCGPHALSDFSDNAGLHLILNLPDEADDVAIARDANARHILVRPLSRYYLTAQRKKGLLMGFASQPETQMEPAFNVLLECLKMHCPQALAEAEKQNAPS*