ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_64011_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: 3268..3894

Top 3 Functional Annotations

Value Algorithm Source
Type 1 fimbriae regulatory protein fimE n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N234_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 208.0
  • Bit_score: 426
  • Evalue 1.10e-116
Type 1 fimbriae regulatory protein fimE {ECO:0000313|EMBL:EWF64006.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 429
  • Evalue 2.50e-117
fimE; fimbrial regulatory protein FimE similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 197.0
  • Bit_score: 349
  • Evalue 3.80e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGAACCGACGTCGTTTTCTTACCGGTAAAGAAGTTCAGGCGATGATGCTGGCAGCCCGCCACGGGCAAACGGGAGAGCGGGATTACTGTCTAATCCTGCTCGCTTTTCGTCATGGTATGCGCATTAGCGAATTACTCGATCTGCACTATCGCGACCTCGATCTTGTCGAAGGCCGCATCAATATTCGACGGCTGAAGAATGGATTCTCCACCGTACATCCTCTGATGGCCGATGAATGTGACGCCATCAGGCGCTGGAGTCAGGTACGCGGCGCCTGGAAAGGCGCGCAAAAAACCGATGCGCTGTTTATATCGCGACGCGGTACTCCGCTTTCGCGTCAGCAGGCTTACCGCATCATCCGCACCGCTGGCGTAGACGCTGGCACGGCTACCCATACTCACCCGCATATGCTGCGCCATGCCTGCGGTTACGAACTGGCGGAGAGAGGGGCCGACACCCGCCTTATTCAGGACTACCTCGGCCATCGAAACATTCGCCATACCGTACGCTATACGGCCAGCAACGCCGCGCGATTCGCCGGACTCTGGGAGCGCAACAACCTGATGGAGTGGAATTTACAAAATCAGAGAATGCAAAATAAGAATTTGATAAATAAGGGAAAATAA
PROTEIN sequence
Length: 209
VNRRRFLTGKEVQAMMLAARHGQTGERDYCLILLAFRHGMRISELLDLHYRDLDLVEGRINIRRLKNGFSTVHPLMADECDAIRRWSQVRGAWKGAQKTDALFISRRGTPLSRQQAYRIIRTAGVDAGTATHTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLMEWNLQNQRMQNKNLINKGK*