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2019_SCN_bioreactor_t3_planktonic_scaffold_111488_34

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(33749..35092)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 447.0
  • Bit_score: 885
  • Evalue 2.10e-254
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Klebsiella oxytoca 10-5242 RepID=H3LC85_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 447.0
  • Bit_score: 886
  • Evalue 6.60e-255
rumA; 23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 447.0
  • Bit_score: 885
  • Evalue 4.20e-255

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGGCGCAATTCTACTCTGCAAAACGGCGTGTGACGACGCGCCAGATCATAACCGTTACAGTAAATGACCTTGACCCCTTCGGCCAGGGCGTTGCGCGTCATCAGGGTAAGGCGCTGTTTATCAGCGGTTTATTGCCACAGGAGCAGGCTGACGTTGTTGTGGTCGAAGATAAAAAACAGTACGCCCGCGCCCAGGTTAAACGCCGTCTTAGCGATAGCCCGCAGCGGCAGGCGCCGCGCTGCCCGCATTTTGGCATCTGCGGCGGGTGCCAGCAGCAGCACGCCAGCATTGAACTGCAGCAGCAGAGCAAACGCGCCGCGCTCGCGAGGCTGATGAAGCGCGAGGTTGATGACATTATAGCCGCTTCGCCGTGGGGCTATCGCCGCCGGGCGCGTCTGAGCTTGAATTATCAGCCAAAGTCCCAACAATTACAGATGGGCTTCCGCAAGGCTAACGCCAGCGAGATCGTCGATGTGGTGCGGTGCCCCGTTTTGGTGCCCACTCTTGGTGCGCTATTGCCCGCGGTACGTGAATGTCTTAGCGAATTGAAATCGGTGCGTCAGCTTGGCCACGTTGAGCTGGTGCAGGCGGATAACGGCCCGCTGATGGTATTGCGCCATACGGCGGCGCTTCCCGCGGCAGATAAAGAAAAGCTGGAACGTTTTTCGCAATCTCACGGTCTTTCCCTGTACCTCGCCCCGCAAAGCGAGATACTGGAACATATTCGCGGGGAAGCCCCCTGGTATACCTCGGACGGTCTACGCTTAGTGTTCAGTCCGCGCGATTTTATCCAGGTGAACGATGGCGTAAACCAGCTGATGGTGCGCACGGCGCTGGAATGGCTGGATATCCAGCCTCAGGATCGGGTGCTGGACCTCTTTTGCGGCATGGGCAACTTTACCCTGCCGCTGGCGAAGCGTGCGGCGCAGGTGGTTGGCGTTGAAGGGGTTCCCGCGCTGGTGGCGAAGGGCCAGGAGAACGCGGCGTTGAACGGGTTGCATAATGTGACTTTCTTCCATGAGAACCTGGAAGAGGACGTCACCCGCCAGGCGTGGGCGAAGCACGGTTTTGATAAGGTCTTGCTCGACCCGGCGCGCGCCGGCGCGGCGGGCGTTATGTTACATATTATAAAATTAGCGCCGCGTCGGGTGGTGTATGTTTCATGTAACCCGGCGACCCTGGCGCGCGATAGCGACGTTTTATTGCAGGCGGGATATACCATTCAACGCCTGGCGATGCTCGATATGTTCCCGCATACCGGACATCTGGAATCAATGGTGTTGTTTGAGCACAAGAATCATTCAAATCGCAGTGAAGCGGCATCCTCAGAAGCAGGTGACTGA
PROTEIN sequence
Length: 448
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFISGLLPQEQADVVVVEDKKQYARAQVKRRLSDSPQRQAPRCPHFGICGGCQQQHASIELQQQSKRAALARLMKREVDDIIAASPWGYRRRARLSLNYQPKSQQLQMGFRKANASEIVDVVRCPVLVPTLGALLPAVRECLSELKSVRQLGHVELVQADNGPLMVLRHTAALPAADKEKLERFSQSHGLSLYLAPQSEILEHIRGEAPWYTSDGLRLVFSPRDFIQVNDGVNQLMVRTALEWLDIQPQDRVLDLFCGMGNFTLPLAKRAAQVVGVEGVPALVAKGQENAALNGLHNVTFFHENLEEDVTRQAWAKHGFDKVLLDPARAGAAGVMLHIIKLAPRRVVYVSCNPATLARDSDVLLQAGYTIQRLAMLDMFPHTGHLESMVLFEHKNHSNRSEAASSEAGD*