ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_116797_20

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(21119..23485)

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=4 Tax=Klebsiella RepID=I6VMM7_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1628
  • Evalue 0.0
outer membrane protein Imp similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1628
  • Evalue 0.0
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1628
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2367
ATGACGGAACAACAAATACAACGTATGAAAAAACGTATTCCCAGCCTCCTGGCCACCATGATTGCCAGCGCCTTGTATAGCCAACAGGGCCTCGCTGCCGATCTCGCCACGCAGTGTATGCTTGGCGTACCAAGCTACAATCGTCCTTTGGTTGAAGGGAAACCCAACGACCTGCCGGTGACGATCGATGCCGATCATGCGAAAGGCAACTATCCTGATAACGCCGTATTTACCGGCAACGTTGATATCAATCAGGGGAACAGCCGACTGCAGGCCGATGAAGTGCAGCTTCATCAGCAGCAGGCCGCGGGCCAGCCGCAGCCGGTGCGCACGGTCGACGCCCTCGGCAACGTTCACTATGATGACAATCAGGTGATCCTCAAAGGGCCGAAAGCCTGGTCGAATCTGAACACCAAAGATACCAACGTCTGGCAGGGCGATTACCAAATGGTTGGCCGTCAGGGGCGCGGTACCGCTGACCTGATGAAACAGCGCGGTGAAAACCGCTATACCATCTTAGAAAACGGCAGCTTCACCTCCTGTCTGCCGGGCTCTGACACCTGGAGCGTGGTCGGCAGTGAAGTCATCCACGACCGCGAAGAACAGGTCGCTGAGATCTGGAACGCCCGCTTCAAGCTCGGTTCCGTACCGATTTTTTATAGTCCCTACCTGCAGCTGCCGGTGGGCGACAAGCGTCGTTCGGGCTTCCTGATCCCCAACGCCAAATACAGCACCAAAAACGGCGTCGAGTTCTATCTTCCTTACTACTGGAACATCGCCCCGAACTTCGACGCCACGCTGACGCCGCACTATATGAGCAAGCGCGGCGGCGTCATGTGGGAGAACGAATTCCGCTATCTGACCAAAGCAGGAACCGGCTTAATCGAGTTCGACTACCTGCCTTCGGATAAAATTTACCAGGACGATCACTCTGGCGACAGCAATAGCCGCCGCTGGCTGTTCTACTGGAACCATTCTGGCGTCGTAGACCAGGTGTGGCGCTTCAACGCCGACTACACCAAAGTCAGCGACCCGGACTACTTTAACGACTTCAGCTCTAAATACGGTTCCAGTACCGATGGCTACGCGACGCAGAAGCTCAGCGCCGGCTACGCGAATCAGAACTTTGACGCCACCGTATCGACCAAGCAGTTCCAGGTCTTTAACCGCGACTCAAGCAACGCCTATTCCGCCGAGCCGCAGCTGGACGTGAACTACTACCAGAACGATGTCGGCCCGTTTGATACCCATCTTTATGGCCAGGCGGTGCATTTTGTTAACTCGAACAGCAGAATGCCGGAAGCAACGCGCGTTCACTTCGAGCCAACCATCAATCTGCCGCTGTCTAACGGCTGGGGAAGCATCAATACTGAGGCAAAACTGCTGGCAACCCATTACCAGCAAAGCAACCTTGATGACTACAACGCGGCCAACGGTACCGATTACAAAGACTCCGTTAACCGCGTCATGCCGCAGTTTAAAGTCGATGGTAAAATGGTTTTCGAGCGCGATATGCAGGAGAACTATACCCAGACGCTTGAACCGCGGATGCAGTATCTGTATATCCCCTATCGTGACCAGAGCAAGATCGGCAGCTACGACTCAACCCTGCTGCAGTCGGACTACAGCGGCCTGTTCCGCGACCGCACCTACAGCGGCCTCGACCGTATCGCTTCCGCCAACCAGGTCTCCACCGGCGTCACATCTCGCGTTTATGATGCCGCCGCCGTTGAACGTTTTAATATTTCCGTTGGTCAAATCTACTATTTCACCGAGGCACGTACCGGTGACGACAACATCAACTGGGAGAACAACGACACGCGAGGTTCACTGGTATGGGCTGGCGATACCTACTGGCGCATCGCCGATGACTGGGGTTTACGCGGGGGAATTCAGTACGATACGCGTCTGGATAACGTCGCAACCGGCAGCGGAACCGTGGAATACCGTCGCGACGAAAACCGTTTAGTACAACTTAACTATCGTTATGCGAGCCCGGAATACATTCAGGCGACCCTGCCGTCTTATTCCACCGCTAAGCAGTACAAAGATGGTATCTCGCAGGTGGGGATGACCGCCAGCTGGCCAATCGTCGATCGTTGGGCAGTCGTCGGCGCGTATTACTACGACACGAATACCAGAAAGTCAGCGAACCAGATGTTAGGGGTTCAGTATAGCTCCTGCTGCTACGCTATCCGCGTCGGCTATGAACGTAAGATCAACGGCTGGGATAACAGCAGCAGCGAAAGCAAATACGACAACACCTTCGGCTTTAACATTGAGCTGCGCGGCCTGAGCTCCAACTACGGTCTCGGCACCCAGCAGATGCTGCGTTCGAACATTTTACCGTACCAGAGCTCCCTGTGA
PROTEIN sequence
Length: 789
MTEQQIQRMKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYNRPLVEGKPNDLPVTIDADHAKGNYPDNAVFTGNVDINQGNSRLQADEVQLHQQQAAGQPQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFYLPYYWNIAPNFDATLTPHYMSKRGGVMWENEFRYLTKAGTGLIEFDYLPSDKIYQDDHSGDSNSRRWLFYWNHSGVVDQVWRFNADYTKVSDPDYFNDFSSKYGSSTDGYATQKLSAGYANQNFDATVSTKQFQVFNRDSSNAYSAEPQLDVNYYQNDVGPFDTHLYGQAVHFVNSNSRMPEATRVHFEPTINLPLSNGWGSINTEAKLLATHYQQSNLDDYNAANGTDYKDSVNRVMPQFKVDGKMVFERDMQENYTQTLEPRMQYLYIPYRDQSKIGSYDSTLLQSDYSGLFRDRTYSGLDRIASANQVSTGVTSRVYDAAAVERFNISVGQIYYFTEARTGDDNINWENNDTRGSLVWAGDTYWRIADDWGLRGGIQYDTRLDNVATGSGTVEYRRDENRLVQLNYRYASPEYIQATLPSYSTAKQYKDGISQVGMTASWPIVDRWAVVGAYYYDTNTRKSANQMLGVQYSSCCYAIRVGYERKINGWDNSSSESKYDNTFGFNIELRGLSSNYGLGTQQMLRSNILPYQSSL*