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2019_SCN_bioreactor_t3_planktonic_scaffold_116797_27

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(30017..32923)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 968.0
  • Bit_score: 1921
  • Evalue 0.0
RNA polymerase-associated protein RapA n=2 Tax=Klebsiella oxytoca RepID=G8WL39_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 968.0
  • Bit_score: 1920
  • Evalue 0.0
RNA polymerase associated protein RapA similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 968.0
  • Bit_score: 1920
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2907
ATGCCTTTTACACTTGGTCAACGCTGGATTAGCGACACAGAGAGCGAACTGGGATTAGGGACGGTCGTTGCGCTGGACGCGCGCATGGTGACCCTGCTTTTCCCCGCCATCGGCGAAAACCGTCTGTACGCACGCAACGACTCCCCAATCACCCGCGTGATGTTTAACCCGGGCGATACCATCACCAGCCACGAAGGCTGGCAACTCCAGGTTGACGAAGTTAATGAAGAGAACGGTCTGCTGGCCTACACCGGCACCCGCCTCGATACCCAGGAAGCCAACGTTACCCTGCGTGAAGTGCTCCTCGACAGCAAGCTGGTCTTCAGCAAACCGCAGGACCGTCTGTTCGCCGGACAGATCGACCGTATGGATCGTTTCGCCCTGCGCTATCGCGCGCGTAAATTCCAGAGCGAACAGTACCGCATGCCGTGGAGCGGCCTGCGCGGTCAGCGCACCAGCCTGATCCCGCATCAGCTGAATATCGCTCACGACGTTGGCCGCCGCCATGCGCCGCGCGTCCTGCTGGCGGACGAAGTGGGTCTGGGTAAAACCATCGAAGCCGGGATGATCCTACATCAGCAGCTGCTCTCCGGCGCCGCCGAACGCGTTCTGATCGTCGTTCCGGAAACCCTGCAGCACCAGTGGCTGGTGGAAATGCTGCGCCGCTTTAACCTGCGCTTCTCGCTGTTTGACGATGAGCGTTATGCCGAAGCGCAGCACGACGCGATTAACCCGTTCGAAACCGAACAGCTGGTGATCTGTTCGCTGGATTTCGTGCGCCGCAGCAAGCAGCGCCTGGAACACCTGTGCGAAGCCGAATGGGATCTGATGGTCGTTGATGAAGCGCACCACCTGGTCTGGAGCGAAGACGCCCCGAGCCGGGAATATCAGGCGATTGAACAGCTGGCCGAATGCGTGCCGGGCATTCTGCTGCTCACCGCGACGCCGGAGCAGCTGGGAATGGAGAGCCACTTCGCCCGCCTGCGCCTGCTCGACCCCAACCGTTTCCACGACTTCGCCCAGTTTGTTGAAGAGCAGCAGAACTACCGTCCGGTTGCCGACGCGGTCGCCCTGCTGCTGGCCGGTAATAAGCTGAGCGACGCCGATCTGAACGCGCTGAGCGATCTGATCGGCGAACAGGATATTGAACCATTATTGCAGGCCGCCAACAGCGATCGCGATGATGCCCAGGCCGCTCGTCAGGAGCTGGTGTCGATGCTGATGGACCGCCACGGCACCAGCCGCGTGCTGTTCCGCAACACCCGTAACGGCGTCAAAGGTTTCCCGAAACGCGAGCTGCATACGATTCGTCTGCCGCTGCCGACCCAGTACCAGACGGCCATTAAGGTTTCCGGCATTATGGGCGCCCGCAAAACCGCCGAAGAGCGCGCCCGCGACATGCTCTATCCGGAGCAGATTTATCAGGAATTTGAAGGCGATACCGGCACCTGGTGGAACTTCGATCCGCGCGTTGAATGGCTGATGGGCCATCTCACCAGCCACCGCTCGCAGAAAGTACTGGTCATCTGCGCCAAAGCGGCCACCGCGCTGCAGCTGGAGCAGGTCCTGCGCGAGCGCGAAGGCATTCGCGCCGCGGTGTTCCACGAAGGGATGTCGATTATCGAACGCGACCGCGCCGCCGCCTGGTTCGCCGAGGAAGATACCGGCGCTCAGGTGCTGCTGTGTTCTGAGATCGGCTCCGAAGGCCGCAACTTCCAGTTCGCCAGCAATCTGGTGATGTTCGACCTGCCGTTCAACCCGGATCTGCTGGAGCAGCGTATCGGCCGTCTTGACCGTATCGGCCAGGCTCACGATATTCAGATCCACGTTCCCTATCTGGAAAGAACCGCCCAGTCGGTGCTGGTGCGCTGGTATCACGAAGGCCTGGACGCGTTCGAGCACACCTGCCCGACCGGCCGTACCGTCTACGACAGCGTGCATAACGAACTGATCAACTATCTTGCCACGCCGGAAAATACCGACGGCTTTGACGACCTGATCAAAGCCTGCCGCCAGCAGCATGAAGCGCTGAAAGCGCAGCTGGAACAGGGCCGCGACCGTCTGCTGGAGATCCACTCCAACGGCGGAGAAAAAGCCCAGCAGCTTGCGGAAAGCATTGAAGAACAGGATGACGACACCAGCCTGATCGCCTTCTCCATGAACCTGTTTGATATCGTCGGCATCAACCAGGACGATCGCGGTGAGAATCTGATTGTCCTGACCCCCTCCGACCATATGCTGGTCCCGGATTTCCCGGGCCTGCCGGAAGATGGCTGCACCATTACCTTTGAGCGTGACGTCGCCCTGTCCCGCGAAGACGCGCAGTTCATCACCTGGGAACATCCGCTGATTATCAACGGTCTGGATCTGATCCTCTCCGGCGATACCGGCAGCAGCACCATTTCGCTGCTGAAGAATAAAGCGCTGCCGGTAGGTACTCTGCTGCTGGAGCTGATTTACGTCGTTGAAGCGCAGGCGCCGAAGCATCTGCAGCTCAACCGCTTCCTGCCGCCGACGCCGGTGCGCATGCTGCTCGACAAAAACGGCAACAACCTCGCCGGTCAGGTGGAGTTCGAAAGCTTCAACCGTCAGCTGAGCGCGGTTAACCGCCACACCGGCAGCAAGCTGGTCAACGCCGTCCAGCAGGACGTCCACGCGATTTTACAGCAGGGCGAAGGGCAGGTAGCCAAAGCGGCCCAGGCGCTGATCGACGCCGCGCGTAAAGAAGCCGACGATAAGCTGACGGCCGAGCTGTCGCGCCTTGAAGCGCTGCGCGCCGTGAACCCGAACATCCGCGATGATGAACTAGCGGCTATCGAGAGCAACCGTCAGCAGGTTATGGACGCGCTGGCGCAGGCGGGCTGGCGCCTGGATGCGCTGCGCTTAATCGTGGTCACCCACCAGTAA
PROTEIN sequence
Length: 969
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYARNDSPITRVMFNPGDTITSHEGWQLQVDEVNEENGLLAYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAINPFETEQLVICSLDFVRRSKQRLEHLCEAEWDLMVVDEAHHLVWSEDAPSREYQAIEQLAECVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLLAGNKLSDADLNALSDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGHLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLERTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHNELINYLATPENTDGFDDLIKACRQQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIINGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKHLQLNRFLPPTPVRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEGQVAKAAQALIDAARKEADDKLTAELSRLEALRAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ*