ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_20804_8

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(10194..12029)

Top 3 Functional Annotations

Value Algorithm Source
TGF-beta receptor type I/II extracellular region n=1 Tax=Schlesneria paludicola RepID=UPI00029AE115 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 611.0
  • Bit_score: 1108
  • Evalue 0.0
TGF-beta receptor type I/II extracellular region similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 346.0
  • Bit_score: 395
  • Evalue 1.80e-107
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 325.0
  • Bit_score: 407
  • Evalue 1.70e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_52_25 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1836
ATGTCAGATCAAGCCATGGATCAAGCAAAAAAGCCACTGACATGGCGCGATATGCCTTCTGGGATTCCCTACATCGTCGGCAATGAAGCAGCCGAGCGGTTCAGTTTCTATGGCATGAAGACGATCCTATTCATCTACATGACCAAGTATCTGGTAAATGCAATGGGTCAACCTGACCCATTCTCCTCAGAGCAGGCACGTGCGGCCGTGCATTGGTTCGTCGCGTCGGCGTACTTTTTTCCCCTGGCGGGAGCGATCCTTTCCGATTGGCTGCTGGGAAAATACCGGACGATTTTTTGGTTATCGCTCGTCTATTGCCTGGGACATCTGGCACTCGCGGCGATTCCAGGGCGGCTTGGCCTGCTTTCGGGACTGACACTGATCGCGATCGGTTCGGGAGGAATCAAGCCTTGCGTCTCGGCACATGTTGGTGACCAATTCACCGAGAAAAATCGCGACTTGCTGCCACGGGTTTACAGTTGGTTCTACTTCTCGATCAACTTGGGTGCATTTATCTCGTCGATGCTGACCCCGTATTTGCTGGAAGAGTTTGGGAAAGAGTGGGGACCGCACGTCGCGTTCGGCTTGCCGGGCTTGCTGATGTTGCTCGCGACATTTGTTTTTTGGCTGGGGCGTAAAAAATTCGTTCACGTCAAACCGGCTGGGTTTTCGTTCATTCGCGAGACCTTCAGTCTTGAAGGTCTCAAGGCCGTCGGTGGCCTGATTCCGCTCTATCTCTTCGTCGCGATTTTCTGGTGCCTATACGATCAGACCGCGTCGGCATGGGTCGAGCAAGCCGAATTGATGGATCGACATTGGCTGGGTGTCAATTGGCTGCCTAGCCAAATCCAGGCCATCAATCCGATCATGATTTTAGTCCTGATTCCCACCTGTACCTACCTTGTCTATCCCGCGATCAGTGCCGTTTTGCCGTTGACGGCGCTGCGGAAGGTCGCGATTGGATTTTTTATTGCGGTGATCTCTTTCGGCATCAGTGCCACGATCGAATCGCAGATCACGGGCGGAAAGCTCATCAAGAACGCCGACATTGAGTCTACGAATGCCGACCCTGCGAATGGAAAATCCCATGAACTGATCGTGCAACTCAGAGAACTTCGTGCTTGGAGCGTGGGGTCAGTCAGCTGGCAATTCGACGAGCCCGGTGTCTCGGACGGAGACTCGTCGGCAGGCGAAATCGGAATTCCATTCACGTTGCGTGTCGAAGTCGGTTCCGCGCCGAAAGGGCCATGGACTGAGAAAGCTTCGGCGGACTTCGCTGCGAACGCATCGGCACCGTACGTTGTGAAATTTCCCGAGCCAGCCTGCGCCAAGTATGTGCGTCTGGTCGCGACCACTTCGTCAACAAAAAGTGAAGCGGAGGCGATCGATTGGAGCAAACCCCAACTGTTACGTGTGCTGGCGGATGAAGACGCTCCGCCTTACGACGCCCATCCTCATGCAGCTCAAGTCTGGCCGGATCTGGCGGCGGTGGGATATCAACCCAACATTGTGTGGCAGCTTGCGGCCTATTTCTTTCTGACGCTGGCCGAGATCTTTATTTCCATCACCTGCCTGGAATTCTCTTATACGCAGGCCCCCAACAAGATGAAATCGCTGGTGATGTCGATCTTCATGCTGTCGGTCGCATTGGGAAATGCATTGACCGCCGCGGTGAACGATTACATTCCGAACGCCGACGGAACGAGTAAGCTGCCAGGTGCAAGCTACTACTGGTTCTTTACGGGATTGATGCTGGCCGCTTCTGTCGGCTTCCTGGTCGTCGTTGCCACCTATCGTGAGAAGACCTACCTTCAGTCGGTCGAAGATCGAGAATGA
PROTEIN sequence
Length: 612
MSDQAMDQAKKPLTWRDMPSGIPYIVGNEAAERFSFYGMKTILFIYMTKYLVNAMGQPDPFSSEQARAAVHWFVASAYFFPLAGAILSDWLLGKYRTIFWLSLVYCLGHLALAAIPGRLGLLSGLTLIAIGSGGIKPCVSAHVGDQFTEKNRDLLPRVYSWFYFSINLGAFISSMLTPYLLEEFGKEWGPHVAFGLPGLLMLLATFVFWLGRKKFVHVKPAGFSFIRETFSLEGLKAVGGLIPLYLFVAIFWCLYDQTASAWVEQAELMDRHWLGVNWLPSQIQAINPIMILVLIPTCTYLVYPAISAVLPLTALRKVAIGFFIAVISFGISATIESQITGGKLIKNADIESTNADPANGKSHELIVQLRELRAWSVGSVSWQFDEPGVSDGDSSAGEIGIPFTLRVEVGSAPKGPWTEKASADFAANASAPYVVKFPEPACAKYVRLVATTSSTKSEAEAIDWSKPQLLRVLADEDAPPYDAHPHAAQVWPDLAAVGYQPNIVWQLAAYFFLTLAEIFISITCLEFSYTQAPNKMKSLVMSIFMLSVALGNALTAAVNDYIPNADGTSKLPGASYYWFFTGLMLAASVGFLVVVATYREKTYLQSVEDRE*