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2019_SCN_bioreactor_t3_planktonic_scaffold_12625_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1030..1545)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGB6_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 165.0
  • Bit_score: 165
  • Evalue 3.00e-38
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 165.0
  • Bit_score: 165
  • Evalue 8.50e-39
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 {ECO:0000313|EMBL:AGA27875.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 165.0
  • Bit_score: 165
  • Evalue 4.20e-38

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGGTCTCGGTGCGCATGGACGATCGCTTGAGTGCGCGTTTCGACGCATCCGATGTTGTTCAAGAAACACTGATCGATGCCGTGCAGAAACTTCCCGAATATCTACGCGAACGACCGCTTCCCTTTTATCCGTGGCTACGCCAAATCGCTTGGAACCGGCTAGTGGATCTCCACCGCGAGCATGTGATCGCCAAGAGACGCACAGTCAATCGCGAGGTCTCATTCGACTCGCCACTTTCCGGCCAGTCTCACTACCGATTGGCAGATCAATTATTCGCACACGATATCTCGCCAAGCTCTCACATATTGCGTGAAGAGCTTGTTCACCGACTTCGCCACGCCATCGGTCGGCTATCGTCGTCGCACCGCGAGGTCTTGATACTAAGGCACTTGGAAGAACTATCGGTGACGGAATCGGCGCTGACACTGAAAATCACCGAGTCGGCTGTCACCTCGCGCCATTTTCGAGCTCTCGCGAGGCTGCGTGATTTACTGGACACAACACCGTTTAAATGA
PROTEIN sequence
Length: 172
MVSVRMDDRLSARFDASDVVQETLIDAVQKLPEYLRERPLPFYPWLRQIAWNRLVDLHREHVIAKRRTVNREVSFDSPLSGQSHYRLADQLFAHDISPSSHILREELVHRLRHAIGRLSSSHREVLILRHLEELSVTESALTLKITESAVTSRHFRALARLRDLLDTTPFK*