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2019_SCN_bioreactor_t3_planktonic_scaffold_14425_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 7295..7774

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Schlesneria paludicola RepID=UPI00029A49C3 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 159.0
  • Bit_score: 307
  • Evalue 5.90e-81
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 158.0
  • Bit_score: 246
  • Evalue 2.70e-63
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 158.0
  • Bit_score: 246
  • Evalue 1.30e-62

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 480
ATGGAACGGCAGCCAATTTCTCGTGAAGGCTACGACAAGAAGAAGGAAGAACTCCGGATTCTCGAAGAGGTCGACATGCCGAGAATTACTCAGGCAATTGCCGATGCTCGCGCAGAAGGAGATCTGCGCGAGAATGCAGAATATCACGGCCAGCGCGAAGCCCAAGGGATGCTGCAGGCACGGATCAATTCTTTGCGATCCACACTCGCCGATTGTTTTATCGTCGACAAGTCAACCTTGCCGAAGGGGGTTGTCGTGTTCGGGACGCGCGTCACGGTGAAAGATTTGAGTGACGGATCGATCGAGCAGTACGAATTCGTCGGCCCCGGCGAAGAAGATTATATGAGTGACGTCATGAAGATTCTGACGACGTCACCTCTCGCCACAGCGATGATGCACAAGAAAGTGGGAGATCACGTTGAGTTCCAAGCGCCACGCGGTGTGACGAACTACGAGATCACACAGATCGACGAAACGTAA
PROTEIN sequence
Length: 160
MERQPISREGYDKKKEELRILEEVDMPRITQAIADARAEGDLRENAEYHGQREAQGMLQARINSLRSTLADCFIVDKSTLPKGVVVFGTRVTVKDLSDGSIEQYEFVGPGEEDYMSDVMKILTTSPLATAMMHKKVGDHVEFQAPRGVTNYEITQIDET*