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2019_SCN_bioreactor_t3_planktonic_scaffold_13759_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2753..3331)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Schlesneria paludicola RepID=UPI00029A9387 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 192.0
  • Bit_score: 365
  • Evalue 2.90e-98
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EDL60107.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 184.0
  • Bit_score: 203
  • Evalue 2.70e-49
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 186.0
  • Bit_score: 174
  • Evalue 2.70e-41

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 579
GTGAATCAGATCCCTGACCATACGCTGATCGAAAGATGTCTGGCTGGTCAACGAGACGCCTTCGGGCTGCTTGTTGAGCGGTACCAGAACCGGCTTTTTCACGCCCTGATGCATGTGTTGGGATCGGCGGAAGACGCGCAGGATGCAGCGCAAGATGCATTTGTTTTGGCGTACGAAAAGCTGGCAACTTTTCGCGGACAGTCTCAATTCTATTCCTGGTTGTTTCGAATCGCGTTCAACCGTGCGGTGACCGAGAAGCGAAAGACGAAGCGCATGTCGACGTCTCTCGATCGTCAGCGCGAATCGAACGGAATGGAGCCCTCTGACGTGAATCCGGCGAGCGAGCCATCGTATGCCATGTATGTTGCCGACCGACAGCGGCGAGTGCAACAGGCCTTGGCAGAACTGTCGCCGGAGTTTCGTACGGCGTTGATCCTTAAAGAGCTGGACGGAATGAGCTACGAAGAAATTGCCGACGCTCTAGAGATTCCCGTAGGAACGGTTCGCAGCCGCATTCATCGGGCTCGACTGGAACTGCGAGACAAGCTGAACGCATTACTGCAATCGGACGTATTGTGA
PROTEIN sequence
Length: 193
VNQIPDHTLIERCLAGQRDAFGLLVERYQNRLFHALMHVLGSAEDAQDAAQDAFVLAYEKLATFRGQSQFYSWLFRIAFNRAVTEKRKTKRMSTSLDRQRESNGMEPSDVNPASEPSYAMYVADRQRRVQQALAELSPEFRTALILKELDGMSYEEIADALEIPVGTVRSRIHRARLELRDKLNALLQSDVL*