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2019_SCN_bioreactor_t3_planktonic_scaffold_15892_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1172..1774

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI000299DD4E similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 200.0
  • Bit_score: 328
  • Evalue 4.10e-87
Probable ECF sigma factor AdsA {ECO:0000313|EMBL:EAQ79188.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 186.0
  • Bit_score: 188
  • Evalue 5.40e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 185.0
  • Bit_score: 186
  • Evalue 7.10e-45

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Taxonomy

Blastopirellula marina → Blastopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGAACGATCCTGTGAACGTCCCCTGTTATTCAAACCGCGAAGAACTTGCGAGATTCATTGAGACGTGCCGCCCTCAGCTACTGGCTTATATCGAACACAATCTTGGCCCTGCCTTGCGAAAGAAACTTGAGGTTGAAGACATTCTGCAGGAAGTGGTTCTGTCAGCATTGAACTCACTACAGTCATTCGCCGTCCCAGGACGCGATCCGTTCAAACTGCTTTGCCAGATGGCCGAACAGCGCATAATCGATGCACATCGGCATCACGTGGCAGCACAGAAACGATCGGCCGATCGTGAGGTTTCCATCGATGCCGCGGTCGGCAATACCGAACCCGTCGGATTGATCAAGCTGCTCGTGGCGAGTATGACATCGCCGAGTCAGGCCTTCTCTCGCGCTCAAAAAGAACTGCGACTACACGAAGTATTGGGCAATCTTCCCGATGAACAACGGGAATTGCTCCGACTTCGATATGTCGAAGGCCTGCCAACCAAAGATGTCGCCGAACATTTGGGGAAATCAGATGGAGCCGTCCGCGTCTTGTTGACTCGGACACTTGCCAAACTCCAGAAAATGTTGAGTGACGCCGAGTGGGTCGAATGA
PROTEIN sequence
Length: 201
MNDPVNVPCYSNREELARFIETCRPQLLAYIEHNLGPALRKKLEVEDILQEVVLSALNSLQSFAVPGRDPFKLLCQMAEQRIIDAHRHHVAAQKRSADREVSIDAAVGNTEPVGLIKLLVASMTSPSQAFSRAQKELRLHEVLGNLPDEQRELLRLRYVEGLPTKDVAEHLGKSDGAVRVLLTRTLAKLQKMLSDAEWVE*