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2019_SCN_bioreactor_t3_planktonic_scaffold_13369_10

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(11969..12262)

Top 3 Functional Annotations

Value Algorithm Source
FmdB family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A2521 similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 98.0
  • Bit_score: 194
  • Evalue 3.40e-47
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 141
  • Evalue 9.70e-32
Regulatory protein, FmdB family {ECO:0000313|EMBL:ADG68745.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 141
  • Evalue 4.80e-31

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 294
GTGCCCACCTACGACTATAAGTGTGATGCGTGCGATCACGTTTGGGAAGAATTTCAATCGATCAAGGCGGCACCCAGCAAGAAGTGTCCAAAATGCGGTAAGTCGAAAGCCCGTCGTCAGATCGGTGGCGGCGCAGGGCTGATCTTCCGAGGTTCCGGCTTCTACCTGACAGACTACCGAAGCGATTCCTACAAGAAGGCCGCCGAAGCGGACAAAAAGGCGTCGGGTGGAGAATCGTCGTCGAAGTCCGACTCGGGGTCGTCAAAAAGCGATTCTGGCAAGAAATCAGACTGA
PROTEIN sequence
Length: 98
VPTYDYKCDACDHVWEEFQSIKAAPSKKCPKCGKSKARRQIGGGAGLIFRGSGFYLTDYRSDSYKKAAEADKKASGGESSSKSDSGSSKSDSGKKSD*