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2019_SCN_bioreactor_t3_planktonic_scaffold_16322_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2..931

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Schlesneria paludicola RepID=UPI00029B013A similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 309.0
  • Bit_score: 602
  • Evalue 2.30e-169
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 307.0
  • Bit_score: 469
  • Evalue 3.80e-130
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 307.0
  • Bit_score: 469
  • Evalue 1.90e-129

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 930
GCCGCCAACGAAGCGGAAGTGTCACGTCGTGAACTGAACGATCTGGTCGAACTCGTTCTCGAAACACCTGCCGAATTCGTGGATCGCGTTCGCCGAATCATGGCGAAGTTCGATGCATGGACTCGTGCGAAACAGCATCTTTCGGGTGGAAACCTACGACTGGTCGTTTCGATCGCGAAGAAGTACCGCAACCGCGGACTAAGCTTCCTCGACCTGATCCAGGAAGGTAACGCCGGTTTGATGCGTGGTGTCGAGAAGTACGAATACCGCCGCGGTTACAAGTTTTCGACTTATGCGACATGGTGGATTCGCCAGGCGATCACCCGTGCCGTCGCTGATCATGCCCGCACGATTCGTATTCCCGTTCACATGTTCCAATGCATCTCGCAGCTCAAAGCCAAGAGCGAGCAGATTCGTCAGGAGACGGGGCGCGATCCAAGCATGGAAGAGTTGGCGGAATCGGTCGGAATGTCGATCGAAGAAACCGAACGCATTATGAAGACCTGGAAGCACCCAGTCAGTCTGGACACTCCGGTCGGCGAAAGCGAAGACGGTTCATTCGGCGACTTCCTGCAAGACGACAACGAAACAAATCCTGCTGAATCCGCGATGCAGGAAATGTTGCGTGACAAGATTGAAGTCGTTCTTCGCAGCCTGACTTATCGCGAACGTGAAATCATCAAGTTGCGTTATGGTCTGGGTGACGGCTACAGCTACACGCTGGAAGAGACTGGCCGAATTTTCAAAGTTACGCGTGAGCGTATTCGTCAGATCGAATCGAAGGCGCTGCGTAAGCTGCAGCACGAAACGCGAGCCAACCACTTGCGTGGATTCGTCGATACGACCGGGGATGAAGTCCCCAATCTGACGGACGAAAATGACGCCACAATGGCAGAAGAGAACGAAGAAGTCTTCGCCGTCGCGGTCTGA
PROTEIN sequence
Length: 310
AANEAEVSRRELNDLVELVLETPAEFVDRVRRIMAKFDAWTRAKQHLSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNAGLMRGVEKYEYRRGYKFSTYATWWIRQAITRAVADHARTIRIPVHMFQCISQLKAKSEQIRQETGRDPSMEELAESVGMSIEETERIMKTWKHPVSLDTPVGESEDGSFGDFLQDDNETNPAESAMQEMLRDKIEVVLRSLTYREREIIKLRYGLGDGYSYTLEETGRIFKVTRERIRQIESKALRKLQHETRANHLRGFVDTTGDEVPNLTDENDATMAEENEEVFAVAV*