ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_7232_13

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(11339..12406)

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein CpaB n=1 Tax=Schlesneria paludicola RepID=UPI00029A06D9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 342.0
  • Bit_score: 658
  • Evalue 2.30e-186
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 320.0
  • Bit_score: 333
  • Evalue 6.40e-89
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ADG67647.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 320.0
  • Bit_score: 333
  • Evalue 3.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1068
GTGAAACGTAGTATCACCCCCACGCTCGTGACATTTGTCATGTTCGGAATCATTGGATTGCTGGTTGCGACATACTTTGTCAAAACCCTGTTCGCCCAAAAGGAAAAGCCCGCGGTGAATAACCTGCGAGAAGTTCCGATGGCGGTAACCGATATCAGCCCAGGAACTGTGATCACAACCGACCACTTGGGCATGGGGCGTTATGATCGTACCAAATTGACGCCAGACGTCTTGTTGGCCAACCGCGTCATCGTGGGCCGTGTGGCAAAGGAAGCAATTCGCGCCGCCAGCCCCATTAAAGCCGGTCAATTGTATCAACCGGGTGAATTGCCTCCGCTGGATATCGGCCCCGGCATGCGTGCCGTCTCGGTCGAAGTGGGTGATGGTGTCGCAGTTGTCGATGGGATCATCAAACCCGGTGATACTGTCGACGTACTCTTCACCGCCCAAGGGGCCGGTGTTGGTAACGACAATACTTACCAGGGCGGCCTGACCTTGCGATTGTTCGAAGGTGTCAAAGTCCTGGCAATCAATCGCAACTTTGCCCAAGGCCGCGTCGATCGCGGCAATAATCACGTCACACTCGAATTGAGCGTCGCGCAGACAAACATCATCGTCCTGGCGAAGGACCGTGGCAAAATCACGTTGACCTACAATCCCAACGGCAAAGGCAATGGCGGGCTCGCCCTGTCGAATTCGGAACGAGTCACGTTATTCGAGTTGTTGGGGCTGGAAAAATCAGATCCACTTCGTGAGCCATTCACGACCGAAATCTATCGTGGCAGCGGACGTGTTTCGAACCGCTTCGACGATCGCGGCCGATATGTCGATAGCGCGGCACGGACACCAACCAGCACGAATCAGAATCCCCAGTACCAACTGCCTAGCAACGTTACACCAAGTCGTAGCCAGACAGCAGTTCCTCAGGACAATGCAGCTCCGACCAATACGGCTCCCGCATTGAACGATGTTCCAAACCGACCGGTTCATCAGACGTTTGTTCCACCAAATGTGCAGTCGGGTGGTCGTCCGGCACCAACAGCTCAATTACTCCAGCCGCGAAATTGA
PROTEIN sequence
Length: 356
VKRSITPTLVTFVMFGIIGLLVATYFVKTLFAQKEKPAVNNLREVPMAVTDISPGTVITTDHLGMGRYDRTKLTPDVLLANRVIVGRVAKEAIRAASPIKAGQLYQPGELPPLDIGPGMRAVSVEVGDGVAVVDGIIKPGDTVDVLFTAQGAGVGNDNTYQGGLTLRLFEGVKVLAINRNFAQGRVDRGNNHVTLELSVAQTNIIVLAKDRGKITLTYNPNGKGNGGLALSNSERVTLFELLGLEKSDPLREPFTTEIYRGSGRVSNRFDDRGRYVDSAARTPTSTNQNPQYQLPSNVTPSRSQTAVPQDNAAPTNTAPALNDVPNRPVHQTFVPPNVQSGGRPAPTAQLLQPRN*