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2019_SCN_bioreactor_t3_planktonic_scaffold_6395_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(6700..8538)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=1 Tax=Schlesneria paludicola RepID=UPI00029B1EEF similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 634.0
  • Bit_score: 360
  • Evalue 2.30e-96
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 119
  • Evalue 1.90e-24
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28748.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 119
  • Evalue 9.40e-24

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1839
CGAGAACAAACCATGGAGAACTTTCCAGAAGTCACCGCGCCACAACCGAGCGTCTGGTCAGAAATTGAGCCACTTCTCGACGAAGAATTGAGCCGCCTTGCAGACAAATATCGAATACCGATTCTGCTCTGTGATTTGGGAGGAAGCACGCAGAAAGAAGCGGCACTCGAACTGGGTTGGCCCGAAGGAACTCTCTCAACCCGCTTAACGAAAGCGCGAGAACTCCTGGCTCAACAATTGAACCGGCGAGGGCTGATGCTGTCGGCAGGAACATTGGCGGTGCTGATTGCCGAGAACACCGCGTCGGCATCCCTTCCCGAAGCCTGGATCGCGACGACACTTCACACGACGAACTCGCTGACAACCAGCGGAATGACAGCTCAATGCCTGTCGACGTCAAAGATCGCCACTCTTGCTCAAGAGGCCATGAAGCCGATGCTCTTCGTGAATCTCAAAGTCGTCGCAGCGATCGCCATCTTCGCGGCCTTGGGTCTCGCTTTCCTGCCACAACAAGCCGATCAGGCGGCCGCAGCGGAAATCACACTTCCTCCCGAAATACAACAGGATCTCGAGGAAGGAGCCAGACAGCTCAATCCGATTGCGATTGCCTACACGAAGCAATTGAAGAGCAGTCTGTCAGAACCAGAAACAATGGAACGGTTGGCGCTCACGGCCGACCGCAATCGCGATTTTTACTTTGATGAAGTGGTCCATCGCGTGATCTGGCAGGACAAGCGGTTCTACACATCAACCAAGTTCCCCGTCGTTGAACGTCTCCCAGCCGAGAACCGCCACAACCGAGGTTTTCAGATCAATCAAACCGCCTTTGATGGACGCATCCTTTACGAAGGCCAGGTCCTCGAACATGGCAACGAAGGGGTATTCGCCAAGGACACAGAGGCCACGTATTCCAAACGTAGGCCCAATCGCACAGTCCGCGACGCATTCTCCAGTCCGTACTTTGTCGATTTCTCCGGATGGAAATTCCCGCCAGGAAAAGAGCGGGCAATCGCCTTACAGGCCGAATCCACTGTACTCGGTGCTTTGCGAGAAGGAGGTAAGCTGGTATCCGTCGAAACGGCCATGCTCGACAAGCGGGCTCATGTAAAAGTGACTCTGACCATCGAAAACACTGCAAAAACGCTGGCGGACAAAATGGATCTCGCCGCAGTTCACAAGAGCTCTGAACAACGTCGTGAACCTCCCAAACAAACTCGACTGGCAGTCGACCAGATCATGCTCTCACGCAAACTGCCAGCGACAAAACGGTTGGTCTGTTACCTCGATCCTGAACGACACCATGCGTTGCGCCGTAGCGAAGAGTGGTACGAACCAAACCAATTATTGGTCCGTTGCGATTGCTACGACTTTGAACAAATCTCCGATCGTCCACTTTGGTTGCCGCGACGATGCGAAGTCGCTCATCGTACGTTTCGAACGGCTCCCGGAATCGTGCTTGAAGGCGAGTTTCTGAAGGAAGTTTTGCAGGTCACAGAGCTAGCCATCACCCCCGCCTCCGATCAGCAATTCGTCTTGAGCTATTCAAGCCCGGGAATTCTTGTTTACGACGAAACAGGTTCAGATCCGAACGCGACCCCTTCAAGCAACACATCCTCAAACGCAGTCCCCTATCTAGCAGGGGCCAGCCCCAACGAAACGTCGCGCAACAAGGCGGCCACACTACGGCAATCCGTCGCGGATCAACCCAGTCCGGATGACAACCAGTCCCCACCACACTCCGATCATATCCCACTCGTTCGTTGGCTGTTGATCGGCAATGTCGCCGTCGTCATCGGCATCGCGATTCTCGTTGCCTATCGAAGGTTTGTCCGCTCTTGA
PROTEIN sequence
Length: 613
REQTMENFPEVTAPQPSVWSEIEPLLDEELSRLADKYRIPILLCDLGGSTQKEAALELGWPEGTLSTRLTKARELLAQQLNRRGLMLSAGTLAVLIAENTASASLPEAWIATTLHTTNSLTTSGMTAQCLSTSKIATLAQEAMKPMLFVNLKVVAAIAIFAALGLAFLPQQADQAAAAEITLPPEIQQDLEEGARQLNPIAIAYTKQLKSSLSEPETMERLALTADRNRDFYFDEVVHRVIWQDKRFYTSTKFPVVERLPAENRHNRGFQINQTAFDGRILYEGQVLEHGNEGVFAKDTEATYSKRRPNRTVRDAFSSPYFVDFSGWKFPPGKERAIALQAESTVLGALREGGKLVSVETAMLDKRAHVKVTLTIENTAKTLADKMDLAAVHKSSEQRREPPKQTRLAVDQIMLSRKLPATKRLVCYLDPERHHALRRSEEWYEPNQLLVRCDCYDFEQISDRPLWLPRRCEVAHRTFRTAPGIVLEGEFLKEVLQVTELAITPASDQQFVLSYSSPGILVYDETGSDPNATPSSNTSSNAVPYLAGASPNETSRNKAATLRQSVADQPSPDDNQSPPHSDHIPLVRWLLIGNVAVVIGIAILVAYRRFVRS*