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2019_SCN_bioreactor_t3_planktonic_scaffold_11229_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 6018..6410

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029B22B4 similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 130.0
  • Bit_score: 241
  • Evalue 2.50e-61
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEF60130.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 129.0
  • Bit_score: 102
  • Evalue 3.30e-19
ytrA; HTH-type transcriptional repressor YtrA similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 127.0
  • Bit_score: 99
  • Evalue 4.30e-19

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 393
ATGGACTTCAGCGTTGATGCGGCAAGCCGGACGCCAATCTACCGGCAACTGGCAGAACAGATTCGATCGGCGATCGCACGGGGGCGGTTGCAGCCGAATGCCCGATTGCCGTCAGTCCGCGATTTGTCGCGGCGGCTGGTGATCAATCCGAACACTGTCGCACGGGTGTATACGGAATTGGAGCGAGATGGCTTGCTGACCACGCGGCATGGTTTGGGTGTGTTCGTTGCTCCCCACGGAAGCGACCTGACAAAAAAGGCTCGACGGGAACGGCTCATCACACTGTTGGATGGTGTCTTTACCGAGGCGGTTCTTTTGGAGTTCACTGCCGACGAAGTCCGAGAGCTCGTCAACGAGCGAAGTGCACAGTTTCAGTGGCAGGCGGGAGTGTGA
PROTEIN sequence
Length: 131
MDFSVDAASRTPIYRQLAEQIRSAIARGRLQPNARLPSVRDLSRRLVINPNTVARVYTELERDGLLTTRHGLGVFVAPHGSDLTKKARRERLITLLDGVFTEAVLLEFTADEVRELVNERSAQFQWQAGV*