ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_3925_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 3935..4267

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/formation protein HypD n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6N438_GORPV similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 100.0
  • Bit_score: 125
  • Evalue 1.70e-26
hypD; hydrogenase expression/formation protein HypD similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 96.0
  • Bit_score: 131
  • Evalue 8.70e-29
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AHH17814.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 96.0
  • Bit_score: 131
  • Evalue 4.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardia nova → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGCGTTATCTCGACGAGTACCGGAAGTCCGAACTGTTACATCATCATTTACGACGCTTACGACTTCAGACGACGCGACGATGGGTCGTAATGGATGTCTGTGGGGGCCAAACCCACACTCTGTTGCGGAGTGGATTAGAAGCTGCGTTGAGTGACATTATTGAGTTCGTTCACGGTCCAGGTTGTCCTGTCTGCGTCACGCCTGCACAGGTCATCGATGATGCAATCGATCTCGCTGGTCGTGATGGTGTGATTGTCACGACATTCGGTGATATGTTGCGCGTTCCAGNGCCGTCCGAACTGTATATTCACCACTCGAAGCCATCTCGCTAG
PROTEIN sequence
Length: 111
MRYLDEYRKSELLHHHLRRLRLQTTRRWVVMDVCGGQTHTLLRSGLEAALSDIIEFVHGPGCPVCVTPAQVIDDAIDLAGRDGVIVTTFGDMLRVPXPSELYIHHSKPSR*