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2019_SCN_bioreactor_t3_planktonic_scaffold_4214_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3743..4210)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusB n=1 Tax=Schlesneria paludicola RepID=UPI00029AFE03 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 155.0
  • Bit_score: 281
  • Evalue 4.40e-73
transcription antitermination factor NusB similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 152.0
  • Bit_score: 177
  • Evalue 1.50e-42
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 152.0
  • Bit_score: 177
  • Evalue 7.40e-42

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 468
ATGTCCCCCCGCCGTCATCAAGCCCGCGAAGTCGCGTTACAAATGCTGTTTCAGAAGGATCTGAACCCAGACGTGTCACCCGACATGATTCGTGAGCAGATCCGTGAAATGCTCGACAACAACGAACAAATGTGTCGATTCGCGTGGAGCTTGTTTGCCGGAACGATCGAATCGCAGAAGATGATCGATCAAAAGATCGAATCGGTTGCCGCGAACTGGACACTCGGGCGAATGCCTCCGACCGATCGAAATGCGATTCGCCTGGGGGCCTTTGAACTACTTTGCACCGACACTCCGCACCCGGTCGTCATTGACGAAGCGCTTGAGTTGGCGAAAAGCTTTGGCTCGGCTCAGTCCGCATCGTTCGTAAATGGGATTTTGGACAAACTCGTTCCGTCAGCGAAACGAAGTGTTCCAAAGGCCGGTGCGAGCGAAGGTGAGAAGTCAGCAACAGAAGAGTCGGAGTAG
PROTEIN sequence
Length: 156
MSPRRHQAREVALQMLFQKDLNPDVSPDMIREQIREMLDNNEQMCRFAWSLFAGTIESQKMIDQKIESVAANWTLGRMPPTDRNAIRLGAFELLCTDTPHPVVIDEALELAKSFGSAQSASFVNGILDKLVPSAKRSVPKAGASEGEKSATEESE*