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2019_SCN_bioreactor_t3_planktonic_scaffold_4342_16

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 15377..16720

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Schlesneria paludicola RepID=UPI000299F4DE similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 456.0
  • Bit_score: 799
  • Evalue 1.40e-228
transcription termination factor NusA similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 436.0
  • Bit_score: 605
  • Evalue 6.40e-171
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 436.0
  • Bit_score: 605
  • Evalue 3.20e-170

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1344
ATGAACGGTCCCGAACTCTTGAGAATCGTTGATGCGATTCATCGAGATAAGAGTATTGACAAGGAGATTGTGTTCGAAGGGATCGAGCAGGCCATTTTGTCGGACGCACGCAAGCACTACGGCGAAGAAGAAGCCATTGAAGTGCATGTCGATCGGATCGGTGGTCATCCCACGGTCAAAACGAACGGTCAAGATGTCGATGCCGATGCTTTGGGCGAGCTTTTGGGGCGAATCTCCGCTCAAACCGCCAAGCAGGTGATGATTCAGAAGATTCGGGAAGCCGAACGCGATGCGCTGTTTGATGAATATGTAGAACAACGAAACCAAATTGTAACGGGAACGGTTTCTAAGCTCGAAGGCGGTTCATCGATCGTCAACCTGGGTAAGGTTGAAGGTCTGCTGCCTCGCGGTGAACAGATTCCTGGCGAAATGTTCCGTGTCGGCGATCGGGTGCGTGCAATCGTTTTGGAGGTACGCAAGTCCGGCAGCCGCGTGAAGATCATTCTGTCTCGAATTCACGTCGAGTTCGTACGGCGGTTGTTTGAGCTTGAGATTCCAGAAGTTGCTGAACGAATTATCGAAGTTCGTTCGCTCGCTCGTGAAGCGGGCTATCGTTCAAAGGTGGCTGTCAGCTGTATCGATAATAACATCGATGCCGTTGGTGCGTGTGTTGGTGTTCGTGGCGCACGAATTAAGAATATCACCGGCGAACTAGGTGACGAGAAGATTGATATCGTTCGTTGGAACGATTCGCTTCAGGTGCTTGTGCCGAACGCACTGCAGCCGGCGGAAGTGGAAGACGTGATTCTGTGCCCGATGCTCGGTCGCGTGATCGTGCTGGTGCGCGATGATCAATTGTCGCTGGCGATTGGCAAGCGAGGTCAGAACGTTCGCTTGGCGTCCAAGCTGGTGGGCTGGGATATTGAGGTGATGACGCGTGAAGAGCTTGATGAGCAGCTCGAACGCGCCGTGCAAGCCTTCTCTGAGACGCCCGGGGTGACAAGCGATTTGGCGGAAAGTCTTGTTGCTCAAGGGTTTTTGAGCTTCGATGACTTGTCGGTGATTGAGCCGGATCAATTGGCCGAGATGGGCGGTTTGACGGAAGAGCAGTGTGACGAGATCGTGGCACATGCTGAGCAGGAAAGTGAGCGACTGGAGCGTGAAGAGCGTCAGCGTCGCGCACAAGAGAAGTCGCAGGGACCATCAGGCGGTAATGATCGGGGCCGATCTCAGGCTCAAGACAAGCCACCTGTGGAAAAGGCGCCACCTGTTCAAGAAACTGAAGAACCGGCTGCCGAAGAGCCACCTCCTGAGACGCCAGCATCTGGCGGCAACGAGGGATGA
PROTEIN sequence
Length: 448
MNGPELLRIVDAIHRDKSIDKEIVFEGIEQAILSDARKHYGEEEAIEVHVDRIGGHPTVKTNGQDVDADALGELLGRISAQTAKQVMIQKIREAERDALFDEYVEQRNQIVTGTVSKLEGGSSIVNLGKVEGLLPRGEQIPGEMFRVGDRVRAIVLEVRKSGSRVKIILSRIHVEFVRRLFELEIPEVAERIIEVRSLAREAGYRSKVAVSCIDNNIDAVGACVGVRGARIKNITGELGDEKIDIVRWNDSLQVLVPNALQPAEVEDVILCPMLGRVIVLVRDDQLSLAIGKRGQNVRLASKLVGWDIEVMTREELDEQLERAVQAFSETPGVTSDLAESLVAQGFLSFDDLSVIEPDQLAEMGGLTEEQCDEIVAHAEQESERLEREERQRRAQEKSQGPSGGNDRGRSQAQDKPPVEKAPPVQETEEPAAEEPPPETPASGGNEG*