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2019_SCN_bioreactor_t3_planktonic_scaffold_6440_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1356..1877

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Schlesneria paludicola RepID=UPI000299D1A9 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 174.0
  • Bit_score: 347
  • Evalue 4.30e-93
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 173.0
  • Bit_score: 236
  • Evalue 2.60e-59
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 173.0
  • Bit_score: 205
  • Evalue 7.50e-51

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGCGTTATCGAAATCCAGCGATTAAGCAGCTTCGTGATCAACAAATCAAATATGCGCCGCGTGATGTCCAATTGACTCAGATTTCACGTGCCGAGCGACTGTTGGATGAATTGAACCCAGTCGGCATGTATCGATATCCAGAACTGTGTGAAAAAATTACGACCTATCGGGGCGAAATGTATCCAGATTTGGTCGTCAGCGGGGCAGAAGCCGTTCATGACCTGCGGTGCTTCGTGGAGGATCTTTCCGACAGTGCCGACATTCCCGTGGAAAACGCCGGTGAAGAAGTTTGGACCGTTGAAGACGTCAGCAAGCGTTTCAACGTCTCGTCGAAAACCGTTTCGCGGTGGCGAGATCGCGGGCTTGTCAGCCGTCGCTTCCGGTTCGGCGGACGGAAGCGTGTTGGGTTCTTGCGATCGTCGGTAGAACGCTTCGTAACCAAACACGCGGATGATGTCGATCGTGGTACGCAGTTTAGTCAATTGACGGTGGAAGAGCGTGAACGATTGATTCAACGTGCA
PROTEIN sequence
Length: 174
MRYRNPAIKQLRDQQIKYAPRDVQLTQISRAERLLDELNPVGMYRYPELCEKITTYRGEMYPDLVVSGAEAVHDLRCFVEDLSDSADIPVENAGEEVWTVEDVSKRFNVSSKTVSRWRDRGLVSRRFRFGGRKRVGFLRSSVERFVTKHADDVDRGTQFSQLTVEERERLIQRA