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2019_SCN_bioreactor_t3_planktonic_scaffold_6471_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 552..917

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI000299F862 similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 123.0
  • Bit_score: 239
  • Evalue 1.50e-60
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 121.0
  • Bit_score: 202
  • Evalue 4.40e-50
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:ADG67420.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 121.0
  • Bit_score: 202
  • Evalue 2.20e-49

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 366
ATGAGCAAGAATCTGTATGTGGGTAATTTGTCTTACAATTGCACGGCTGATGACCTGCGCGAGCTGTTCAGCCAACACGGCAATGTAAGTTCGGCGCAGGTGGTGTCGGATCGCGAAACAGGCCGTTCACGCGGTTTCGGTTTCGTGGAAATGTCCGACGGTGGCGAAGCAGCAATCGGTGCATTGAACGGAGCGGAGTTCCAGGGCCGAACGCTGACGGTGAATGAAGCTCGTCCCCGCGAAAGCGGTGGCGGCCGTGGTGGATACGGCGGCGGTGGTGGTGGCGGCCGTAGCGGCGGCGGCGGTGGACGACGTGGTGGCGGTGGCGGTGGCGGCTACGGCGGTGGTGGTGGCGGTCGTTACTAA
PROTEIN sequence
Length: 122
MSKNLYVGNLSYNCTADDLRELFSQHGNVSSAQVVSDRETGRSRGFGFVEMSDGGEAAIGALNGAEFQGRTLTVNEARPRESGGGRGGYGGGGGGGRSGGGGGRRGGGGGGGYGGGGGGRY*