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2019_SCN_bioreactor_t3_planktonic_scaffold_7019_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(4959..5495)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI00029A1D54 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 178.0
  • Bit_score: 303
  • Evalue 1.20e-79
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 175.0
  • Bit_score: 90
  • Evalue 4.70e-16
Tax=RBG_16_Planctomycetes_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 169.0
  • Bit_score: 115
  • Evalue 4.00e-23

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Taxonomy

RBG_16_Planctomycetes_64_10_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 537
ATGGAAGACGATTCCAGTTTGGTGCAAAGGTCTGTGGAGGGAGACTCCGCAGCGTTTGGGCTTTTGTATGACAGGTATGCGGCCATCATCAGAGCGATGGCATTCGACATCACGCACGATCTGAACCTCGCACAGGATTTGGCGCAAGATGTGTTTCTTAGGGCGTATGCGAAATTGCCGACAGCCCGCAACGGAGACCGATTCGGTCCATGGTTGATCGCGGTCGCGAGACACTGCTTTCAAGAGTGGCGCCGATCCCGGCGCCGTGATCGGCATCGATTCACGGCAGAACCGTTAGATGTGATCTGTACCGTGGAATCTCAGGCGGAAGAGTTGACGGCGGCACTTCGGCTAGCGATTGCTCAGTTGCCCGAGCGCGAACGGTTGGCGCTGCACCTGCACTATCTCCAGGAGCAGCCCGTCGCCGTCGCACAGCAGGTTCTGGGGCTTTCCTACTCTGCCTTCTACAAAATCGTGGCTCGAGCACGCGAACGTCTGGCTCGAATTCTGTCGAACGAACAGGAGATCATTCCATGA
PROTEIN sequence
Length: 179
MEDDSSLVQRSVEGDSAAFGLLYDRYAAIIRAMAFDITHDLNLAQDLAQDVFLRAYAKLPTARNGDRFGPWLIAVARHCFQEWRRSRRRDRHRFTAEPLDVICTVESQAEELTAALRLAIAQLPERERLALHLHYLQEQPVAVAQQVLGLSYSAFYKIVARARERLARILSNEQEIIP*