ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_24017_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2..769

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8C13 similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 255.0
  • Bit_score: 490
  • Evalue 6.00e-136
Probable IolI protein {ECO:0000313|EMBL:EDL60221.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 255.0
  • Bit_score: 269
  • Evalue 3.10e-69
sugar phosphate isomerase/epimerase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 255.0
  • Bit_score: 236
  • Evalue 5.80e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 768
ACACCGCTGCTCGAGAAAATTCGAGTCGCGGGCCAGGCAGGCTATTCCGCCATCGAGCTATGGCATGACGATATCGAGCCGTTCCTCGTCTCAGGTGGAAAGCTGTCGGATATTCGTAAGGCACTGGACGATCAACGCCTGGAGCTGCCGACAACGATCTATCTGCGTGGCTGGTGCGACACCAATGGAGAGGAGCACGCCAAGGGTTTAGACGAATGCAAACGACGGCTTGAACATGCCGCCGCACTGGGGGCGACCTATACAATCGCGTGCCCGGCACTGGGGAAGGTAGATGTCGCGTTGGCGGCTCGCAACTATGCAGAACTTTTGGATATTGGATTGTCGTTCGGTGTGAAGCCGGCGTTCGAGTACTTGGGTTTTGTCGAGCAGATCAATTCGATTGATGCCGCACTCGAGGTCATCACGCTGTCCAAGCATCCGCAAGCGACCGTCATTATCGACCCATTTCACAACTTCCGCGGCGGCGGTAGTTTTGATTCGCTGAGCTTGCTGCGAGGAGATCAGATTGCGATCAGCCACTTCAACGACACGCCGTCGTCTCCACCACGCTTGGAACAACACGACCACAGCCGCGTACTGCCGGGCGAAGGGCATCTGGATCTCAAGCAGTGGGTACGATTGCTTAAGGCAACGGGCTACGATCGCTGGCTTTCGCTTGAGCTGTTCAACGAGGCTCTCTGGGCTCGCGATCCGCTAGAGGTCGCCAAAATTGGTCTCGATTCGATGAAAGCGATCGCAGAATCATAA
PROTEIN sequence
Length: 256
TPLLEKIRVAGQAGYSAIELWHDDIEPFLVSGGKLSDIRKALDDQRLELPTTIYLRGWCDTNGEEHAKGLDECKRRLEHAAALGATYTIACPALGKVDVALAARNYAELLDIGLSFGVKPAFEYLGFVEQINSIDAALEVITLSKHPQATVIIDPFHNFRGGGSFDSLSLLRGDQIAISHFNDTPSSPPRLEQHDHSRVLPGEGHLDLKQWVRLLKATGYDRWLSLELFNEALWARDPLEVAKIGLDSMKAIAES*