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2019_SCN_bioreactor_t3_planktonic_scaffold_25122_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 627..1355

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Schlesneria paludicola RepID=UPI00029A00A0 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 242.0
  • Bit_score: 431
  • Evalue 3.20e-118
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 206.0
  • Bit_score: 161
  • Evalue 1.70e-37
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 227.0
  • Bit_score: 167
  • Evalue 1.60e-38

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Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 729
GTGCGTTACGATTCAGTGATGTCAGACAAATACAATCTACCGCCGATAAATGCTTCTCCAGACGGGGCTGTGCCCGATCCGGGCACGGAGCACGCCGATATCGTCCAGCGAATCCTTGCTGGTGATCAAGAAGCGTTGGGTGAACTGTTCGCGATTTACCGTCCCCGCCTGTGGCGCCTCGTTACGTTTCGCCTGCATCCCAGCCTCCAGGGCCGCATCGACGCAGAAGATGTGCTTCAGGATGCATGGTTGCGTGCCATTGAGCGAATTGATCACTTCTACGAAGGTGCGGGCGAGTCGTTTCTGTGGTTTCGTACGATCGTGACGCAAACGCTGATCGATCTGCAGCGGTTCCATCTTGGCGCCCGCAAACGATCCGCCACGCGCGAACAATCGATCAACGGAGGTTGGGCATCGGCTTCGACATCGTCTTGTCTCGCGTTTCATTTGTCAGATTCAGCACGTTCGCCCAGCAGCAATGCCTCGCACGCCGAACTCACGAAACAGCTGGATTCTGTGCTGCTTGGCATGAACGAAGTCGATCGCGAGATTCTTGCACTTCGCCATTTTGAAGCGCTCAACAACAACGAGGTTGCCAAACTGCTGAACCTTTCGGAACAAGCCGCCAGCGTCCGCTACATTCGCGCACTTGGGCGGCTGAAGCAGATTCTCGAACTGGTTGTTCCAGACGCGTTCGATTCAAAAGTCAATAAGAAGACGAACGGGTGA
PROTEIN sequence
Length: 243
VRYDSVMSDKYNLPPINASPDGAVPDPGTEHADIVQRILAGDQEALGELFAIYRPRLWRLVTFRLHPSLQGRIDAEDVLQDAWLRAIERIDHFYEGAGESFLWFRTIVTQTLIDLQRFHLGARKRSATREQSINGGWASASTSSCLAFHLSDSARSPSSNASHAELTKQLDSVLLGMNEVDREILALRHFEALNNNEVAKLLNLSEQAASVRYIRALGRLKQILELVVPDAFDSKVNKKTNG*