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2019_SCN_bioreactor_t3_planktonic_scaffold_25122_18

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 19129..20187

Top 3 Functional Annotations

Value Algorithm Source
helix-turn-helix domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AAB7B similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 350.0
  • Bit_score: 602
  • Evalue 2.00e-169
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 353.0
  • Bit_score: 325
  • Evalue 1.70e-86
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADG69883.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 353.0
  • Bit_score: 325
  • Evalue 8.50e-86

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1059
ATGCCAGACGAACCTGTTTCGACAAATCGCATTCGCCAGCGTCGAATGTCCTTGGGGCTGACCCAGGCTGAGCTCGCCGCTCGCGCCGGGATTTCTCGCACGGCAGTGACAGCGATCGAGGGTGAGCGATTAGCTCCCTCTGTCGACGCAGCTCTGGCAATCGCGAAGTCGCTCGAGAGTACTGTTGAGGAATTGTTTGGACGCGAACAGAGTGAGTCCGCCGCGGATGTGTGGGCTTGGGAGACGCTGTCCGAATCATCTCCTTCCTGGCAGGCGGAAGTCGGTGGTAGGCGAGTTCACTATCCTGCCAGTTCCATGCCCATGCTATCAGTGCTTCCCGATCGTCAATTCCGCAACAAACTAGCGGCCGAGGCAAAATTGGCGGGTGAAACGCTCGTCATGGCCTGTTGCGATCCTGCGGCGGGGCTGCTGGCAAGTCAGTTCGCCGCAGCGACGGGGTTGCGATTACTCGTCATACCTCGGTCGAGTCGCCAGGCAGTTGAAATGTTGCGCGATGGGTTGGTGCATTTAGCGGGCCTACACCTGTCGACGTGCGAAAGGCCTGATCGCAATCTGGATCTTGTCCGCAGTGCCATCGGTGATGACTTTCAGGCCATTCGCCTGGCAAATTGGCAAGAGGGAATCGCGTTGGATGCCTCCTCGAGTCATCGCTCGGTACGATCCGTCCTGGCGTCGAAGTTGACTTGGATTGGACGGGAGCCAGGTTCCGGGGCGAGGCAATGTCTTGATCGGTTGCTTGAGCATCGCCCGGGGCCACGACGTTCTGCCCGCGATCATCATGGTGTCGTCGAGGCCGTTCGATCGGGATGGGCAGATGCTGGAGTCTGCGTACAGCTCACAAGTGTCGAAGCTGGCTTGAAGTTCCTGCCCGTTCAAGAAGAGTTCTTTGATGTCTGTTATCCGACCTCACTCGCTGACGACCGCCGAATCAAGGCGTTTCTGAACGTGGTTCGCTCAACCGCGTATCGTCGTCTTCTCTCGGATCTTCCGGGGTATGACACCCGCGAGACGGGGAATCTGTGCGGTGGTGGAACATAG
PROTEIN sequence
Length: 353
MPDEPVSTNRIRQRRMSLGLTQAELAARAGISRTAVTAIEGERLAPSVDAALAIAKSLESTVEELFGREQSESAADVWAWETLSESSPSWQAEVGGRRVHYPASSMPMLSVLPDRQFRNKLAAEAKLAGETLVMACCDPAAGLLASQFAAATGLRLLVIPRSSRQAVEMLRDGLVHLAGLHLSTCERPDRNLDLVRSAIGDDFQAIRLANWQEGIALDASSSHRSVRSVLASKLTWIGREPGSGARQCLDRLLEHRPGPRRSARDHHGVVEAVRSGWADAGVCVQLTSVEAGLKFLPVQEEFFDVCYPTSLADDRRIKAFLNVVRSTAYRRLLSDLPGYDTRETGNLCGGGT*