ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_25653_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 4100..5860

Top 3 Functional Annotations

Value Algorithm Source
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029A22EB similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 578.0
  • Bit_score: 908
  • Evalue 2.10e-261
Membrane protein containing DUF1355 {ECO:0000313|EMBL:EMI17561.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.1
  • Coverage: 564.0
  • Bit_score: 236
  • Evalue 8.70e-59
signal peptide similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 585.0
  • Bit_score: 221
  • Evalue 5.80e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula maiorica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGATTTGGTCTCCCACATATTCCCACTTGCTCATTGCTGCGTCCGTAACAAACGCGACCGGCGCCGACGCATTTCAGCGGTTTACATTTCTGGGACCATTGACTGTGAAATCAGCGATTGGACTCGGATTCCTCCTGGTACTCGCTTGTGCAATGACGCTTTGGCTGGAAGCGCGTTTCAGCGGAAAACGTTGGGTCCCATGGTTCTTACCACTACGCTTCGTCGTTCTCGGAGCAACACTGTGGATGTGCCTGGAACCGACGCAGACAACGGTGATGCGTCGTTCTGAACGCAAGACACTTGCAATTCTGACGGACATCAGCGAGAGCATGGAGACCGTCGACGCGTCGGACCCCGCAAAGGATCTCAGGTGGGCTGTTGCAAGCCGCCCTGCCGACACGATCAAACTCGTCTCGCTATGTGATCGCCTGCTGGTTTCAACCACCGAGGCGTGGCGATGCTTGCAGCAAGCGCAGAAATTGAGTGAGTCGCACCGGGCTTTCCAGGCACTGCGCGAACAAGTCAATCAGGCGCTGAAGGCCGCTGACAACTCACAGTCTCTTTATAGCTCCATCTTGAAGTCTTCAGAGCCTTTGCTTCTGTCAGAGAAATCATTGATCGAAAACAATTATGCATCACTGCGTGACGAAATCATCCCGTCACTGCAACAGCTGTCACAGCAAGCAAAATCAGGCGCGTCATCGCTCCAGATCCAATCGACGATGATTCGAACTTTGCTGACACGACTGGAACACGAAATCAAGTTCGATCGAAAATTGTCGGCGCTTGCACTCGACCGCGACTTGGCGAGCGGCAACTCGGCTTCATTCACGACGACGGCGAAACCTAGCAGTCGGCGCGAACGAGTCAACGCGGTCTTGGAAGGTGCCGAATCCAGTTGGATCAGCCGCATCGAACGCGAAAGTCGCATTCTGCGTTGGGCATTTGATCATCGTATTACGCTCCTCGCGGACAAGGACTGGAAGCAATCCGGGAATGCGATGCCCGAAACTCAAGCTGACACGCCGCGGACGACGAATCTCAGTGCTGCACTCGAACTCATCGGACGAACTGCTGCGAGTGAGCGAATTGAAGCCGTGGTACTCATTTCGGATGGTCGGCAGACCGATTCGACGGAGCGAAGTCCACAAGACGTCGCTGCCAGCTTGGGGCACATTCCATTCTTCGTCGTCGCAGTTGGCGACGATCGATTAATGCGGGACATCGAACTGCATCGAATCGATGCTCCGCGTGCTGTCGCCAAGAACGACAAGATCGTCATTGAATCTCTGGTGACAGCTTCCGACTGCGTCGGCGAAACGCTTCAGATCGAACTCATCGCCCGAGATGCACTACGGAATGAAGAGATCCTTGAACGCCAGCAATTCATACCGCAAACCCCGCGCGCCGATCACCCCGTCTCATTCACGACGACCCGTAGCGAGACCGGTCGTTATGAGTACGCAGTACGTGTCGTTCCAGTCGCCGACGAAGTCTCGGAAAACAACAATGAAGAATCAATTACGGTGGACGTGATTGAAGACATCATCAACGTACTTCTGGCCGACAACAGTCCTCGTTGGGAATTTCGATTTCTGTCGAACCTGTTTGAGCGTGATTCACATATCAAGCACCACCAATTGATTTTTCATCCGACTCCCGCGGGAACGGGAGAACTTGCCGAGAGCGCCCAGCTACCTGTTGAACTTGATGGATGGAGCCGTTACAGAGTCGTGATTCTGGGAGATTTACTCGCTTCG
PROTEIN sequence
Length: 587
MIWSPTYSHLLIAASVTNATGADAFQRFTFLGPLTVKSAIGLGFLLVLACAMTLWLEARFSGKRWVPWFLPLRFVVLGATLWMCLEPTQTTVMRRSERKTLAILTDISESMETVDASDPAKDLRWAVASRPADTIKLVSLCDRLLVSTTEAWRCLQQAQKLSESHRAFQALREQVNQALKAADNSQSLYSSILKSSEPLLLSEKSLIENNYASLRDEIIPSLQQLSQQAKSGASSLQIQSTMIRTLLTRLEHEIKFDRKLSALALDRDLASGNSASFTTTAKPSSRRERVNAVLEGAESSWISRIERESRILRWAFDHRITLLADKDWKQSGNAMPETQADTPRTTNLSAALELIGRTAASERIEAVVLISDGRQTDSTERSPQDVAASLGHIPFFVVAVGDDRLMRDIELHRIDAPRAVAKNDKIVIESLVTASDCVGETLQIELIARDALRNEEILERQQFIPQTPRADHPVSFTTTRSETGRYEYAVRVVPVADEVSENNNEESITVDVIEDIINVLLADNSPRWEFRFLSNLFERDSHIKHHQLIFHPTPAGTGELAESAQLPVELDGWSRYRVVILGDLLAS