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2019_SCN_bioreactor_t3_planktonic_scaffold_25698_11

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(8863..9234)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Schlesneria paludicola RepID=UPI00029ACE47 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 123.0
  • Bit_score: 240
  • Evalue 9.00e-61
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 122.0
  • Bit_score: 147
  • Evalue 1.30e-33
Polysaccharide deacetylase {ECO:0000313|EMBL:ADG66524.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 122.0
  • Bit_score: 147
  • Evalue 6.50e-33

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 372
TGGGACATGATTCGCGAGATGAGACGAAATCGCATGACGTTCGGTGGACACACCGTCAATCATCCGATCCTGGCCAATCTTTCGGATGAACAGCAAGACGAGGAAATCAGTGGGTGTCGTCGTCGCCTGGTTGAAGAACTGGGTGAACCAATCGACGCATTCAGCTACCCTGTCGGCGGCTCCCGCAGCTTCAACGCGGACACGCGCAAAGCGCTCGTCAAGCATGGATTCAAGTGGGGATTTACTTATCTGGGTGGATACTTCCACTACGGCGAAGAAGATCTTCTTGCTATTCCACGAACCGCGATCGAGACCGATATTGATCTGTCGATGTTCCGCGCGATCACCACCCTGCCTCAAATCTTCGCCTGA
PROTEIN sequence
Length: 124
WDMIREMRRNRMTFGGHTVNHPILANLSDEQQDEEISGCRRRLVEELGEPIDAFSYPVGGSRSFNADTRKALVKHGFKWGFTYLGGYFHYGEEDLLAIPRTAIETDIDLSMFRAITTLPQIFA*