ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_25774_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3279..5369)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis CheB/CheR fusion protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B4DA2 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 696.0
  • Bit_score: 1208
  • Evalue 0.0
hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 736.0
  • Bit_score: 323
  • Evalue 1.30e-85
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EIJ33757.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 659.0
  • Bit_score: 323
  • Evalue 3.70e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2091
GTGCAGAACGACAAACTTCTCGACGAAATCCGCGAGGTGTTGAAGACTGGAAGCGTTTACGAAAAGGAAGTGCAAGATACCTCGGACCGTTGGTTCCTGATGCGGATCCTTCCATACACCACCGACAAGGGAAATGAAGGTGTCGTGCTGACGTTGACGGACATCAATCTGACCCGTCGAGCACAGATGAATCTGAAACGGGTGATCGATTTCTTCCCGCACGCCGTGATTGCGACTGACGATCATGGTTTGGTTCAAATGGTGAACCAAAGAACGCAGTTGATTTTCGGCTATGACGCACACGAAATGCTCGGACAACCGGTGGAGTTGCTATTGCCGAATCGGTTCCGTGAGGAAAGTCAGCCAGACCCACAGCAAGCCGCTTCGCGCTCACAACATTCCGAACAGGATCAATTGGTCGAGCTTACGGGACGACGAAAGAGCGGCGAAGAATTCCCTGTCGAAGTCAGTTTCAACTCGATCAATACCGAAAAGGGAGTGCTGATTCTCGCTTCGGTCAACGACATTACGATACGGCATTTGACTCAGAAAGAGCTTGCGCGGCGTGAAGAAGAACTGCGGCTGGTGATCAACAGCGTTCCGATGCTGATTGCCTACATCGACGTCAACTACGTCTATCGCTACGTCAATAACTTCTATTGTGAAAAACTGAATCTGTCGCCGGATGACGTGCGCGATCGCCGAATTGAAGACGTGGTTGACGCAGAAACGTATGCGCAAAAGCGAGAGCACCTGGATCGAGTGTTTGCCGGCGAACCGATTACCGCCGAGTTACGCAGGTCGTTCCCAAGTGATCCGTCGCATCATGAAACGTGGATCCTGGCACACTATGTTCCGGATCGAGATGAACGCGGGAATGTGCGCGGTTGCTTCGTCGCGATGAACGACGTCACCGAACTTAAAGAACTCGTTGCCACCAAGCAATTGCAGGTTGAACAGCGGGATTTGTTCTTGGCGACGTTGTCGCATGAGTTGCGTAATCCGTTGGGGGCTGTGACATCTGCACTTTGGTTACTTCAAGCCAACCGTGACAATACCGAACTGCAACGGACGACGCTTGCTGCGATCGATCGACAGACGCGTCAAATGACGGCCCTGCTGGATGATTTGCTGGATGTGGCCCGGGTCACGCGCGGCAAGATCGCCCTGGATCGCTCGCCGGTATTGCTCGATCAAGTCATTGGAGAATCTGTGGAATCGGTGATGCCGGCGTTTGACAAACGAGGGCAAAAAATCGAGACAATCCTTTGTCAACAACAGGCCTGGGTTGACGGAGATCTGGTCCGATTGCGGCAGATCGTCACCAATTTGCTTTCGAATGCTTCCAGGTACAGTGCCACTGGGAAAACCGTGAGGCTCAGTTTGAAAGTCGAGGCCCCGAGCAGCGGGAAACCGGGCTTGGCAGTCATCGCGGTTCGTGACGAAGGAATCGGAATTGCGCCCGAAGTTCACGAAAAGATTTTCGAGCCCTTCGCACAGCTACGAAGAACACATAATGAAGCTTCCGAAGGGTTGGGTTTGGGATTGTCGTTGTCTCGTCGATTGGCTGAACTGCATGGCGGAACAGTCACCGTTGCGAGCGAGGGCGAAGGCTGCGGCAGTGAATTCTGTGTGCGACTGCCGTTGATCGAGGCTCCGCCTGCTCCCGTCATTTCGCTTGGCACTTCCGCAAGTATTGATGGCAAGTCGTCACAGTCGATCGTGTTGGTCGAAGACAATGAAGATGCGCGCGATCTGCTGCGACAACTTCTCGAATTTGAGCAGTTTCAAGTCCACACCGCTCCAGATGGTTTGAAGGGATTGGATCTGATTCGAAGTGTGCGGCCACAGTTTGCCGTTGTCGACATCGGTCTACCCGGGATGAATGGGCATGATCTGGCTCGCGAAATCCGACGCAACGATCGCAGCACAATTCTGATCGCTGCAACGGGCTATGGCCAAGAATCCGATCGCGAAGCTGCGCTCGAAGCAGGTTTCGACGAACATATCACGAAGCCATTGAATTTCGATGAACTACTGCTGCTTTTGCGAAGAGTTTCGACACCTGCCTACCGCACACGTCCTAAATAA
PROTEIN sequence
Length: 697
VQNDKLLDEIREVLKTGSVYEKEVQDTSDRWFLMRILPYTTDKGNEGVVLTLTDINLTRRAQMNLKRVIDFFPHAVIATDDHGLVQMVNQRTQLIFGYDAHEMLGQPVELLLPNRFREESQPDPQQAASRSQHSEQDQLVELTGRRKSGEEFPVEVSFNSINTEKGVLILASVNDITIRHLTQKELARREEELRLVINSVPMLIAYIDVNYVYRYVNNFYCEKLNLSPDDVRDRRIEDVVDAETYAQKREHLDRVFAGEPITAELRRSFPSDPSHHETWILAHYVPDRDERGNVRGCFVAMNDVTELKELVATKQLQVEQRDLFLATLSHELRNPLGAVTSALWLLQANRDNTELQRTTLAAIDRQTRQMTALLDDLLDVARVTRGKIALDRSPVLLDQVIGESVESVMPAFDKRGQKIETILCQQQAWVDGDLVRLRQIVTNLLSNASRYSATGKTVRLSLKVEAPSSGKPGLAVIAVRDEGIGIAPEVHEKIFEPFAQLRRTHNEASEGLGLGLSLSRRLAELHGGTVTVASEGEGCGSEFCVRLPLIEAPPAPVISLGTSASIDGKSSQSIVLVEDNEDARDLLRQLLEFEQFQVHTAPDGLKGLDLIRSVRPQFAVVDIGLPGMNGHDLAREIRRNDRSTILIAATGYGQESDREAALEAGFDEHITKPLNFDELLLLLRRVSTPAYRTRPK*