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2019_SCN_bioreactor_t3_planktonic_scaffold_3542_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3119..4501)

Top 3 Functional Annotations

Value Algorithm Source
Fis family sigma-54 specific transcriptional regulator with PAS/PAC sensor n=1 Tax=Schlesneria paludicola RepID=UPI00029B44FE similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 459.0
  • Bit_score: 816
  • Evalue 1.10e-233
Transcriptional regulator {ECO:0000313|EMBL:EDL61053.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 449.0
  • Bit_score: 341
  • Evalue 1.50e-90
helix-turn-helix Fis-type protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 467.0
  • Bit_score: 265
  • Evalue 2.80e-68

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGACCAAACGCGTTCGAACAACTCGACGGCTGGAAGTCTGGTTGAAAGACACCTCGGTCGCCCTCTTCGTGCTGAACGCACATCGGCGTCTCGTGTTCTTCAACTTCGGATGTGAACAACTGACGGGTTGGACACCCGGTGATGTCCTGGGGCAGGTCTGCGACTTTGTGACCGAAACCGACACCCACCTCCCCATCGCCGTCCTGGCGTCCCTAGCAGCCCCGTCGGACGTGTGGAGTGGCAAGACGACCAGTGTTCCCGTTTTCTTGCCTCGTCGCGAACTTGAATCCGTTTCCAGTGTCATCCACTACTACCCCCTGACTGACGCCGAGCACAAGGTTCAAGCGGCACTGGGAATCATTCAACTTGAGACGAGTGATGTGAAGCCGATCATGGTCTCGCAATCGCAGCGACTCCATCGTGAGCTCGCAGAACTGCGAGCCTCGATTCGGCAAATGTTTACGGAAGAATCCCTGATCGGACGAAGTCCCGCCATTCGGCGTGTCATGGAACAACTGAAACTCGCACAGCAGTCGTCGGTGCCGGTTCACTTTTCCGGTGAAGCCGGATCGGGGCGCGAACACCTCGCCCGCTGGGTGCACTACAACAGTCCCGCTGGGCAACGACCGTTTGTCCCCCTGGATTGCCGCAAGTTACCCATTGATCAACTGCAATCGACATTCGAACGCCTGACAACGGCCGCCAACGAGGAAGCCTTTCGTCCCGGAACCGTCTACCTGAACCATGTCGACGTACTGTCACGCGAGCTACAGCGACTCGTGTTGGAATTGATCGAATCGAAAGATCCTTTGCGCCCTCGAATCATGACCGCCTCACACAGTCGACTTCGGCCCTTCGTTGAATCTGAGCAGTTGCTGGAAGAACTGTACTTTTCCCTGACGTCGCTTGAAGTTGAAGTACCACCGCTACGTCATCGCCCCGAGGATCTGCAGTTGCTAGGGCAGTACTTTCTCGAAGAGCTCAATCGTGGCGACCCGGTCCAAATCAGTGGCTTTGCGGATGAGGTCTGGCAGCAATTTCGTCGTTACAATTGGCCGGGAAATGTCGGAGAATTGCGTGCTGTCGTGATCGAAGCTCGCAAAAATTGCCCGGGAGCAATGATCGAATCGGCCCACCTGCCCTTCCGGTTCCGGACCGGCGTCGATCGGCAGACCGTCGGTCCGATGCCACGCCCGCGTGTCGTCCCGCTCGATCCACTCTTGCTTCAGGTTGAGCGAGAACAAATCGAACTGGCACTCGCAGAAGCCCATCAGAATCGGGCGAAGGCCGCTGAAATGTTGGGCATCACCCGCCCGCGTCTCTATCGTCGAATGGAATTGCTGGGACTGATTGAAGAAAACTCCGAAGATGACGGAACCTGA
PROTEIN sequence
Length: 461
MTKRVRTTRRLEVWLKDTSVALFVLNAHRRLVFFNFGCEQLTGWTPGDVLGQVCDFVTETDTHLPIAVLASLAAPSDVWSGKTTSVPVFLPRRELESVSSVIHYYPLTDAEHKVQAALGIIQLETSDVKPIMVSQSQRLHRELAELRASIRQMFTEESLIGRSPAIRRVMEQLKLAQQSSVPVHFSGEAGSGREHLARWVHYNSPAGQRPFVPLDCRKLPIDQLQSTFERLTTAANEEAFRPGTVYLNHVDVLSRELQRLVLELIESKDPLRPRIMTASHSRLRPFVESEQLLEELYFSLTSLEVEVPPLRHRPEDLQLLGQYFLEELNRGDPVQISGFADEVWQQFRRYNWPGNVGELRAVVIEARKNCPGAMIESAHLPFRFRTGVDRQTVGPMPRPRVVPLDPLLLQVEREQIELALAEAHQNRAKAAEMLGITRPRLYRRMELLGLIEENSEDDGT*