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2019_SCN_bioreactor_t3_planktonic_scaffold_30009_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(437..1930)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXB7_PIRSD similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 513.0
  • Bit_score: 527
  • Evalue 8.70e-147
glycine betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 513.0
  • Bit_score: 527
  • Evalue 2.50e-147
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 498.0
  • Bit_score: 541
  • Evalue 8.20e-151

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Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGACGGTGCAGTACAGACTTCTCACGATGTTATTGACGATGTTTCTTGCAGCGTCCGAGGTATTGGCTGAAGGGGCCCGGGTCCGAATTGGTTCCAAGGCCCTAACCGAAGGCGTAATCCTGGGCGAAATTCTGACGCTGATCGCCGATGACGCAGGATTCGACTCCGAGCACCGGGCGGCGTTGGGAGGAACCCAGATCGTATTCAAGGCATTGCAGTCGGGCGACGTTGACGCCTACGCCGACTATACGGGCACGATTTCGCAGGAGCTGCTGAAAGGCCAGCAGATCCGCGATGAACTGCAGATGCGTGAGGCCTTGAAGAAGCTGGGGATCGGGATGACTGATCGTCTGGGCTTCAATAACACCTATGCGATGGGATTGAAGGAATCATTCGCTGAGGAGCGAAACATCCGCACGATCTCGGATCTCGCCAAGAATAAAGAACTGAAACTGGGATTGAGCGACGAGTTCCTGCAACGGCAGGATGGCTGGCCAGGGTTGAAGCGGACCTACCGATTGCCACAAGAGCCCACCGGGATGGAGCACAATCTGGCATATCGCGCACTCGATGCCCGATCGATTCATGTCACGGATTTGAACTCGACTGATGCGGAAATTCAGTACCACAAATTGCGCGTGTTGACCGACGATCAGGGGTACTTTCCACAGTATTTCAGTGTCATTCTTTATCGGTTGGACTTGGCACAGAAGGCACCTGCCATGGTGAATGCCATTCATGGGCTAGAGGGAAAGTTCGATGATTCGATGATGATCGAGCTGAATGCACGAGCAAAAATCGACCGCGTTCCAGAGAAACAAGTGGCCGCTGACTGTCTTGGCCGCCACTTCGGCATGCAACTGAAGGTCGAGCACGAGTCGATTCTTGGCAAGCTCTGGAATACGACTTGGGATCATTTGGGCCTGGTGTTGGTTTCGTTGGGAGCGGCGGTCGTCGTCGCCATTCCATTGGGGATTGCTGCGGCCAAATTGCCGAAGTTCGGACAAGTGATTTTGGGGGTCATTGGTGTTGTCCAGACGATCCCTTCGATGGCGATTCTGGTGTTCATGATTCCATTCCTGGGAATTGGTTATTGGCCAGCGATCGTGGCTTTGTTTCTTTACAGTCTGCTGCCGATTGTGCGGAACACTTACGCCGGGCTGACGGGAATCCCGGCGTCGCTCAAAGAATCTGCTGAAGTGCTGGGATTGCCCCATTTCGTTCAATTGCGGCGAGTGGAGTTGCCTCTGGCGTCGCCGATGATTCTCGCGGGGATCAAGACGGCAGCGGTCATCAATGTTGGCACAGCAACCATTGGCGCATTGATCGGTGCAGGAGGGTATGGTCAGCCGATCCTGAATGGAATTCGCCTGAACAACACACAGATGATTTTGCAGGGTGCGATACCCGCGGCGCTCATGGCGATTGCAGCACAGCTTGTTTTCGAGTTGATCGAACGCCGCTGTGTTCCGAAAGGATTGCGACAGAAGTGA
PROTEIN sequence
Length: 498
MTVQYRLLTMLLTMFLAASEVLAEGARVRIGSKALTEGVILGEILTLIADDAGFDSEHRAALGGTQIVFKALQSGDVDAYADYTGTISQELLKGQQIRDELQMREALKKLGIGMTDRLGFNNTYAMGLKESFAEERNIRTISDLAKNKELKLGLSDEFLQRQDGWPGLKRTYRLPQEPTGMEHNLAYRALDARSIHVTDLNSTDAEIQYHKLRVLTDDQGYFPQYFSVILYRLDLAQKAPAMVNAIHGLEGKFDDSMMIELNARAKIDRVPEKQVAADCLGRHFGMQLKVEHESILGKLWNTTWDHLGLVLVSLGAAVVVAIPLGIAAAKLPKFGQVILGVIGVVQTIPSMAILVFMIPFLGIGYWPAIVALFLYSLLPIVRNTYAGLTGIPASLKESAEVLGLPHFVQLRRVELPLASPMILAGIKTAAVINVGTATIGALIGAGGYGQPILNGIRLNNTQMILQGAIPAALMAIAAQLVFELIERRCVPKGLRQK*