ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_28043_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1728..2207)

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Schlesneria paludicola RepID=UPI00029A3EFA similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 159.0
  • Bit_score: 286
  • Evalue 1.10e-74
Cupin 2 conserved barrel domain-containing protein {ECO:0000313|EMBL:EMI15781.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 158.0
  • Bit_score: 194
  • Evalue 6.00e-47
cupin similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 159.0
  • Bit_score: 193
  • Evalue 4.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula maiorica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 480
ATGTCTCGGCAACCAACAATCGTTAGTCCGGCTGAAGGACGCATGATCGCAGTCGTTGGGGATGTGTATCGATTCCTCGCGACGGGGGCCGAGACTGAAGGGCGATACGCGATGTGGGAGGCTGTCGTTCCGCCAGGGGGCGGACCTCCACCACACGAGCACTCGCGTGAAGAAGAATCGTTTTACGTGCTCGAGGGAGAAATCACATTTCACTTGCAAGGTCGTTGCGTCGTGGCAAAGGCAGGTGAATTTGCCAACATGCCTGTTGGTCTCACGCACTCGTTCAAGAATGAGAGCCAGCAAACGGCACGGATGATCATTTCGGTGGCGCCTGCTGGATTAGAACAAATGTTCTTTGAAGTCGGGACTCCCGTTGCACCTGGCACGACAGAGGTTGCACCACCGACGAAGGCGGAGATCGAAAAGCTGCTGGAGGCCGCGCCGCGATATGGCATAACAATCCACGCTCCATCGCATTGA
PROTEIN sequence
Length: 160
MSRQPTIVSPAEGRMIAVVGDVYRFLATGAETEGRYAMWEAVVPPGGGPPPHEHSREEESFYVLEGEITFHLQGRCVVAKAGEFANMPVGLTHSFKNESQQTARMIISVAPAGLEQMFFEVGTPVAPGTTEVAPPTKAEIEKLLEAAPRYGITIHAPSH*