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2019_SCN_bioreactor_t3_planktonic_scaffold_29080_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1182..2360)

Top 3 Functional Annotations

Value Algorithm Source
YjgP/YjgQ family permease n=1 Tax=Schlesneria paludicola RepID=UPI00029B0C69 similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 392.0
  • Bit_score: 736
  • Evalue 7.40e-210
YjgP/YjgQ family permease similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 394.0
  • Bit_score: 338
  • Evalue 2.20e-90
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ADG68338.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 394.0
  • Bit_score: 338
  • Evalue 1.10e-89

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCGGCAACTCGAACGCTATGTGATGATGGAAGTGCTCCGAGTATTCGGGGCGATGATTACCATTTCCACATTGCTCTTCGTGTTCGTTGGTGCCTTCAGTGAAGCGCAAAAGCTGGATCTGGGAATTTGGCAGGTTCTGCAGATCATTCCCTATGCGATCCCAAACTTGATGCCGTACACGATTCCAGCCACTTTGCTGCTGACCGTTTGCGTCGTTTACGGTCGGATGGCGGGTGACAGCGAAATCATCGCTGCGCGCGCTGCTGGCGTGCACATCTTCCACCTGATCTGGCCATCTCTCTTCGTCGCCGCGACACTGAGTATAGGGACTTTGGTTCTCACGGATCAGGTCATCCCTTGGGCATTCAGCAATATCGAGCGCGTTGTCGCCTTGGCGATGGAAGACATATTCCTCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAAGGGTTATGGTGTTACGATCAATGTGACCGGGGTTCGTGGACGGAACCTGATCAATCCGACAATCCGAGTGGTTCGCGGTGGGAAGGCGAGCACCGTACAAGCAGAAGAAGCTCACATCGAATTCGATCTCAGGAATCAATTGATCTGGCTATCGTTGCGTAAGATTCGAGGCAAGTTCGCGAAGAATATCCAACTGAAGTCTGAGTACGAACGGATCTCGTACGCGTTGCCGAAACATGGAGGCAATTCAGGAAGTCGCGTCAAGCGCACACGCGAACTGCTCGTCGCGCTTGATGGTCAGCATGAGCGGCAACGAATGGCCAAACAGAAGCAGGCCGTTGAATCGGCGTTTTCGTTGGCACGCGGCGACTTCGAGGCGTTTAGCAGCACCAGCTTCAATGCTCATGAGCAAACCGCCAAGTCGGCCATACATGAGATTCGAGGTTTGCGAACCGAGTACTACAATCGGTTTGCCATGTCTGTGAACTGTTTTTTCGTCGTACTGCTGGGAACACCGTTTTCGATCCTGATGGCGAAGAAGCAATTCTTGACGACGTTCTTGTTTTGTTTCTTGCCAATTCTGACGGTCTATTACCCGATCGCGATGATGACGCAGAATCTTTCGAAATCTGGTCAGCTTGATCCGAGTTGGTCGGCATGGATGGCAAACGGAGCCTTGCTAGTCGCGGCGATCTATTACATGCACCGCGTCGTAAAGAACTGA
PROTEIN sequence
Length: 393
MRQLERYVMMEVLRVFGAMITISTLLFVFVGAFSEAQKLDLGIWQVLQIIPYAIPNLMPYTIPATLLLTVCVVYGRMAGDSEIIAARAAGVHIFHLIWPSLFVAATLSIGTLVLTDQVIPWAFSNIERVVALAMEDIFLDXXXXXXXXXXXKGYGVTINVTGVRGRNLINPTIRVVRGGKASTVQAEEAHIEFDLRNQLIWLSLRKIRGKFAKNIQLKSEYERISYALPKHGGNSGSRVKRTRELLVALDGQHERQRMAKQKQAVESAFSLARGDFEAFSSTSFNAHEQTAKSAIHEIRGLRTEYYNRFAMSVNCFFVVLLGTPFSILMAKKQFLTTFLFCFLPILTVYYPIAMMTQNLSKSGQLDPSWSAWMANGALLVAAIYYMHRVVKN*