ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_36341_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3..344)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E n=1 Tax=Schlesneria paludicola RepID=UPI00029A99F3 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 114.0
  • Bit_score: 221
  • Evalue 2.30e-55
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 114.0
  • Bit_score: 184
  • Evalue 1.50e-44
Type II secretion system protein E {ECO:0000313|EMBL:ADG67748.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 114.0
  • Bit_score: 184
  • Evalue 7.60e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCAGCCCCCACCGTTTCCTCGTCTCGCGGTCGCAATCCATCTTCCAATGAAATGGATTTTGACAGTCTGAAACGCTTGATCCATGGCAAATTGGTCGAAAAGCTTGACCTTTCACGCCTGGGCGAACTCCAGGGCGAAACACTTCGTCGCGAGATTCGTCTGGTCATCGAACATTTGTGCGATACAGAGAATGCGCTGCTGAACCGTTCCGAACGCGAACGGTTGATCGAAGAAGTTCTCGACGAAACGTTCGGGTACGGTCCGCTGGAAATCCTGCTGAAAGAGCAGGGGGTCGCGGACATCATGATCAATGGTCCCAAGAATGTCTTCATCGAAAAG
PROTEIN sequence
Length: 114
MAAPTVSSSRGRNPSSNEMDFDSLKRLIHGKLVEKLDLSRLGELQGETLRREIRLVIEHLCDTENALLNRSERERLIEEVLDETFGYGPLEILLKEQGVADIMINGPKNVFIEK