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2019_SCN_bioreactor_t3_planktonic_scaffold_36692_12

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(10791..11144)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Schlesneria paludicola RepID=UPI00029AB8CE similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 128.0
  • Bit_score: 226
  • Evalue 1.30e-56
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 128.0
  • Bit_score: 169
  • Evalue 4.00e-40
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 128.0
  • Bit_score: 169
  • Evalue 2.00e-39

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGCCGCGTATTCAAGGTGTGGATTTGCCAGGCGACAAGCATGTCGTGGTGGCGTTGCAATACATCTACGGCATCGGTGATTGGGTCGCAGCGGAGTTGTGTTTCCGATTGGGAATCGACCCGTTTTTGAAGGCGTCGGCCCTCACTGATGAAGCGGTGTCACGCATCACGACGCTGCTCGATAAGGATTACCTTGTCGAAGGACAGCTGCGACGTTCGATTCAGCAGAACATCGCACGCCTGCGAGATATTCAGTGCTACCGCGGAATGCGGCATCGCCGGAATCTTCCAGCTCGCAAGGGCTTGAAGAAGACGGTTGCAGGTAAGAAGGGTGTTAAGGATATGAAGCACTGA
PROTEIN sequence
Length: 118
MPRIQGVDLPGDKHVVVALQYIYGIGDWVAAELCFRLGIDPFLKASALTDEAVSRITTLLDKDYLVEGQLRRSIQQNIARLRDIQCYRGMRHRRNLPARKGLKKTVAGKKGVKDMKH*