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2019_SCN_bioreactor_t3_planktonic_scaffold_36692_22

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(16158..16499)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Schlesneria paludicola RepID=UPI00029A88F4 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 113.0
  • Bit_score: 224
  • Evalue 2.70e-56
50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 141
  • Evalue 1.10e-31
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 141
  • Evalue 5.60e-31

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGCGCGTGCGAAAAGGTGATCTAGTAGTGGTCGTGGCCGGGGACGACGCAAGCCATGTCGCAAGAAAGGTCTTGCGAGTCTTGGATGGCGGCGAGCGGTTGCTGATCGAAGGTGTGAATCGCGTTTACAAACATGTGAAGCGAGGACACCCAAGCAGTCCACAGGGCGGGCGACTGTCACGTGAGCTGCCAATCGCGGCTTCAAACGCGATGTTTTTCTGCAGTCAATGTAACAAGGGTGTTCGCGTCGGAACACGCGTGAGCGAAACGACGCGTGAGCGATACTGCAAAAAGTGCAAGGGTTCGCTCGGGGTCATCGGTCGTCAAAAGGCTGGCGCCTAG
PROTEIN sequence
Length: 114
MRVRKGDLVVVVAGDDASHVARKVLRVLDGGERLLIEGVNRVYKHVKRGHPSSPQGGRLSRELPIAASNAMFFCSQCNKGVRVGTRVSETTRERYCKKCKGSLGVIGRQKAGA*