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2019_SCN_bioreactor_t3_planktonic_scaffold_30279_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1880..2491

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Schlesneria paludicola RepID=UPI00029AACDD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 203.0
  • Bit_score: 404
  • Evalue 4.50e-110
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 203.0
  • Bit_score: 297
  • Evalue 2.90e-78
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 203.0
  • Bit_score: 297
  • Evalue 1.40e-77

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGGGTCGGTATTCGGGTCCCAAAGGACGTGTCAATCGCCGGTTAGGTGCGATGGTGTTTGAAAACGCCGGGGCGGCGCGGGCATTGGAAAAGCGACCGAGCCCGCCCGGTATGGCCGAGCGACGCCGAAAGCTGTCGACCTACGGTATGGCTCTCGCCGACAAGCAAAAGATCAAGTACCACTACGGTATGCGTGAAGCTCAGCTGCGCCGATACTTCGCCAAGGCTCGCGCCCAAAAGGGTAACACCGGCGATATTCTTCTCGTTATGTGCGAACGACGCCTCGACAACGTTGTCCGTCGTGCCGGTTTCACCGTCACGCGGCTTCAAGCTCGTCAGGGGATTGTTCACCGCCACTTCCAGTTGAACGGCAAAACCGTCAACAAGCCTTCGATCTTCGTTGGCCCTGGCGACGTGATCACCCTTCGCAATCGCCCAAACGTGAAGAAGCTCTACCGCGAAATCGTTGACAGCTCGTCACGTCAATCGGTGGACTGGGTTTCGTTCGACTCGAAGGACCTCGAAGCACGCGTTCAGGCACTGCCAACGCCACGCGATGCAACGGTTCCGCCAATCGAAATCGGTCGCGTTATCGCCTTCATGTCGCGCTGA
PROTEIN sequence
Length: 204
MGRYSGPKGRVNRRLGAMVFENAGAARALEKRPSPPGMAERRRKLSTYGMALADKQKIKYHYGMREAQLRRYFAKARAQKGNTGDILLVMCERRLDNVVRRAGFTVTRLQARQGIVHRHFQLNGKTVNKPSIFVGPGDVITLRNRPNVKKLYREIVDSSSRQSVDWVSFDSKDLEARVQALPTPRDATVPPIEIGRVIAFMSR*