ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_30893_10

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 8318..9367

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA helicase n=1 Tax=Schlesneria paludicola RepID=UPI00029B3554 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 310.0
  • Bit_score: 557
  • Evalue 5.50e-156
DNA helicase RecQ {ECO:0000313|EMBL:KHE90320.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 309.0
  • Bit_score: 366
  • Evalue 3.30e-98
recQ; ATP-dependent DNA helicase RecQ similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 311.0
  • Bit_score: 359
  • Evalue 6.20e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Scalindua brodae → Candidatus Scalindua → Candidatus Brocadiales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAAACCACTGGATATTCTGCGAACTCGTTTCGGACACGAATCGTTCCGACCGCCTCAAGAACAGATCATTCGCCGCGCCCTGGATGGCGCGCATTCGCTCGTGATCATGCCCACTGGCGGAGGAAAATCTCTGTGCTATCAGATCCCTGCTTTAATGATGGGCGACGGTGAACCATCAAAGCCAGGAAAGGTTCCCCTGACGCTCGTCCTGTCGCCACTCATTGCGCTGATGAAAGATCAGGTGGATGCGTTGCGCAGTCGTGGGATCGATGCGACATTCATCAATTCGTCATTGTCGCGAGACGATCGCGAACGTCGTTACGCCGGTGTGAGTGCTGGTAAATACAATCTGCTTTATGTCACACCCGAACGATTTCGAAAGGTAGAGTTCACCGACGCACTTTCGAGTCGGGATGTGCGATTGCTCGCCGTCGACGAAGCGCATTGTATCAGCGAATGGGGGCATGATTTTCGACCTGACTACACGCGGCTTCGTGAACTTCGCGCGCAAATCGGAAATCCAACGACCATCGCATTAACGGCAACGGCGACTCCCGATGTGCAGGCAGACATCGTTCGTCAACTGGGGCTGACGCCTGAAGATGTACGTGTGTTTCATCAGGGAATTGACCGTCCAAACTTGCGATTGTCAGTCGACGAGGTGTGGGGTGACGATGAAAAGGTCGAGCGAATTGCCCGAATCGCTCAGAACTACGCGGATCAACAGGGAAGCGGGATCGTCTATTTCACGCTGATTCGAACGTTAGAGCGGTTCAGCGAACGCTTGCGTGCGATGAAGATTCCCCATCTGTGCTACCATGGCGATCTTGATCGAACTTTGCGGCGGCGAATCCAAAACCAGTTTATGCGCGGAGAATGCCCGCTTGTCCTGGCGACGCCTGCATTCGGAATGGGTATCGACAAGGACNNNNNNNNNNNNNNNNNNNNTGATTCATGGAGAAATTCCAGGGTCGATGGAGGCTTGGTACCAAGAGATTGGCCGAGCAGGTCGCGATGGTTTACCCTCGGATTGTGTGCTGCTCTATGA
PROTEIN sequence
Length: 350
MKPLDILRTRFGHESFRPPQEQIIRRALDGAHSLVIMPTGGGKSLCYQIPALMMGDGEPSKPGKVPLTLVLSPLIALMKDQVDALRSRGIDATFINSSLSRDDRERRYAGVSAGKYNLLYVTPERFRKVEFTDALSSRDVRLLAVDEAHCISEWGHDFRPDYTRLRELRAQIGNPTTIALTATATPDVQADIVRQLGLTPEDVRVFHQGIDRPNLRLSVDEVWGDDEKVERIARIAQNYADQQGSGIVYFTLIRTLERFSERLRAMKIPHLCYHGDLDRTLRRRIQNQFMRGECPLVLATPAFGMGIDKDXXXXXXXDSWRNSRVDGGLVPRDWPSRSRWFTLGLCAAL*