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2019_SCN_bioreactor_t3_planktonic_scaffold_44870_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 110..505

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A3865 similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 96.0
  • Bit_score: 146
  • Evalue 1.90e-32
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 94.0
  • Bit_score: 144
  • Evalue 1.50e-32
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:ADG67304.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 94.0
  • Bit_score: 144
  • Evalue 7.70e-32

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 396
ATGCGAATTTCGCCAAAGCCGTCAATTGAGATTTGTCTCTCACCATCCAAGACTTTTCGGGTGTCACGTTTGGCAGGGCGTCTCGGGAAAGAAAGAAGTAGTATGGGTACGAAGCTTTACGTCGGAAATCTTGCATACGGTACAGACAACAATTCTCTTGAGGCGATGTTCTCCAGCTTTGGCCAGGTGAACTCGGCGCAGGTGGTAACGGATCGTGACACCGGCCGTTCCAAGGGATTTGGGTTCGTTGAATTTGGAGATTCCCAAGCAGCCAATGCGGCAATCGCAGGGTTGAATGGCAAAGAAGTGGGTGGCCGTAGCCTGACGGTCAACGAAGCCAAGCCGCGTGAAGAACGTGGAGGCGGTCGATCGGGTGGTGGTGGTCGCCGGTATTAG
PROTEIN sequence
Length: 132
MRISPKPSIEICLSPSKTFRVSRLAGRLGKERSSMGTKLYVGNLAYGTDNNSLEAMFSSFGQVNSAQVVTDRDTGRSKGFGFVEFGDSQAANAAIAGLNGKEVGGRSLTVNEAKPREERGGGRSGGGGRRY*