ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_42249_8

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 11459..12202

Top 3 Functional Annotations

Value Algorithm Source
transcription factor n=1 Tax=Schlesneria paludicola RepID=UPI00029A60B5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 247.0
  • Bit_score: 485
  • Evalue 2.50e-134
transcription factor jumonji/aspartyl beta-hydroxylase similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 242.0
  • Bit_score: 326
  • Evalue 4.10e-87
Transcription factor jumonji/aspartyl beta-hydroxylase {ECO:0000313|EMBL:ADG67672.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 242.0
  • Bit_score: 326
  • Evalue 2.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 744
TTGCTCGAGCTGGCAAAGTCGCTGCCAGAGGATTTGATCGAATACAATGCCGGAAATCTGCCCGTGAATCAGGATCAGCATCTGACTCCACGTAACGGACTGTCGGTCGAAGAAACCATTCGACGGATCGAAAGCTGTAAGTCATGGATGGTGTTGAAGCATGTCGAAAATGATCCCGCCTATCGCCATCTGTTGCACGAGTGTCTTGCGGAAGTGAAGCCATATTCCGAACGTGTCGTACCCGGCATGTGCGACGCATATGCGTACATCTTCATGACGTCACCCAATTCTGTGACGCCTTACCATATGGATCCGGAACACAATTTCCTGTTGCAGATTCGCGGTTCCAAGACGGTTCATCTGTTCGACGGACGAGATCGCTCGATTGTTTCGGAACGCGATCTGGAGACGTTCTATGGTGCGGTGACTCGGAACATGGAACTCACGGACGAGAATCGTAAGAAGTCGATGGTGTTCGATCTGCAGTCCGGGCAGGGATTGCACTTCCCGGTGACGTACCCACATTGGGTCCAGAATGGAAACGCCGTCTCTATCTCGTTCAGCATTACCTTCCGCACTCCCGACCTTGAGCGCCGTAAAACCGTTTACAGCATGAATCACCAGAAGCGGCTGCGGGGTGGCGAGCCAACACCTTACGGCGTTTCTCCCTGGAAGGACAGTGTGAAGTTCAACTCGTTCCGCCTTTGGCGCAAGGCGAACAGTTTGATTGGTCGGACGGTCTAG
PROTEIN sequence
Length: 248
LLELAKSLPEDLIEYNAGNLPVNQDQHLTPRNGLSVEETIRRIESCKSWMVLKHVENDPAYRHLLHECLAEVKPYSERVVPGMCDAYAYIFMTSPNSVTPYHMDPEHNFLLQIRGSKTVHLFDGRDRSIVSERDLETFYGAVTRNMELTDENRKKSMVFDLQSGQGLHFPVTYPHWVQNGNAVSISFSITFRTPDLERRKTVYSMNHQKRLRGGEPTPYGVSPWKDSVKFNSFRLWRKANSLIGRTV*